Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G463000.1 | Wheat | mitochondrion | 87.72 | 83.74 |
| TraesCS3A01G073900.1 | Wheat | cytosol | 14.55 | 70.15 |
| TraesCS7A01G540400.2 | Wheat | cytosol | 20.85 | 69.66 |
| TraesCS7A01G540300.1 | Wheat | cytosol | 29.93 | 60.17 |
| TraesCS6A01G269800.1 | Wheat | cytosol | 16.51 | 58.61 |
| TraesCS7A01G539900.1 | Wheat | cytosol | 45.92 | 56.62 |
| TraesCS7A01G540500.1 | Wheat | cytosol, extracellular, peroxisome | 8.46 | 53.95 |
| TraesCS4A01G476000.1 | Wheat | cytosol | 25.08 | 52.6 |
| TraesCS7A01G540200.3 | Wheat | cytosol | 32.71 | 50.08 |
| TraesCS5A01G444900.1 | Wheat | cytosol | 23.94 | 47.64 |
| TraesCS7A01G540700.1 | Wheat | plasma membrane | 15.79 | 44.87 |
| Zm00001d048612_P001 | Maize | cytosol | 26.63 | 36.44 |
| TraesCS2A01G368500.1 | Wheat | cytosol | 8.46 | 32.93 |
| TraesCS6A01G237600.1 | Wheat | cytosol, golgi, plasma membrane | 7.64 | 32.46 |
| TraesCS6A01G004500.1 | Wheat | cytosol | 26.42 | 32.24 |
| TraesCS2A01G024800.2 | Wheat | cytosol, nucleus, plastid | 4.64 | 30.2 |
| TraesCS7A01G301500.1 | Wheat | cytosol, golgi, plasma membrane | 7.33 | 29.83 |
| TraesCS7A01G300700.1 | Wheat | cytosol | 6.6 | 26.34 |
| TraesCS5A01G524700.2 | Wheat | nucleus | 24.66 | 24.26 |
| TraesCS2A01G412000.1 | Wheat | cytosol, plastid | 5.99 | 23.97 |
| TraesCS6A01G247700.1 | Wheat | cytosol | 5.78 | 23.93 |
| TraesCS6A01G242200.1 | Wheat | cytosol, golgi, plasma membrane | 5.37 | 22.41 |
| TraesCS4A01G479800.1 | Wheat | cytosol | 30.86 | 20.91 |
| TraesCS4A01G309200.1 | Wheat | cytosol, nucleus, plasma membrane | 40.56 | 19.34 |
| TraesCS4A01G497800.1 | Wheat | cytosol | 28.17 | 19.27 |
| TraesCS3A01G467600.2 | Wheat | cytosol | 5.88 | 15.7 |
| TraesCS5A01G445000.1 | Wheat | cytosol | 6.4 | 12.28 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.46 | Gene3D:2.130.10.10 | Gene3D:2.60.40.10 | MapMan:20.7.1 | Gene3D:3.30.200.20 |
| InterPro:G-protein_beta_WD-40_rep | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000535 | InterPro:IPR000719 |
| InterPro:IPR001680 | InterPro:IPR013783 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:Ig-like_fold | InterPro:Kinase-like_dom_sf |
| InterPro:MSP_dom | PFAM:PF00069 | PFAM:PF00400 | PFAM:PF00635 | PRINTS:PR00320 | ScanProsite:PS00107 |
| ScanProsite:PS00108 | ScanProsite:PS00678 | PFscan:PS50011 | PFscan:PS50082 | PFscan:PS50202 | PFscan:PS50294 |
| PANTHER:PTHR27002 | PANTHER:PTHR27002:SF225 | InterPro:PapD-like_sf | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 |
| SMART:SM00320 | SUPFAM:SSF49354 | SUPFAM:SSF50978 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS7A01G541400 |
| EnsemblPlants:TraesCS7A01G541400.1 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| TIGR:cd00200 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:717920601..717943374
Molecular Weight (calculated)
111040.0 Da
IEP (calculated)
6.556
GRAVY (calculated)
-0.318
Length
969 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYDMLEQIL EGKEKPTNLP FALLKKITDD FSEEREIGQG GFGTVYKGVL RNRNVAVKRI MNNYTIDKKL FYREVNSLLK VNHRNVVRFL GFCANTEQAA
101: IKIEGKKEYI YAEIRERLLC FEYVSNGNLQ NYITDELRGL EWNVRFQIIK DICEGLFHLH MENHIIHMDL KPANILLDHH MVPKVTDFGL SRLDENSQTM
201: CANRFLSLGY CAPEYLHSGR MSVKSDIYSL GVIIIELVTG HKSIPGNNNV SVVRRWRHRW KKSGNEMPLG YEQVTKCIEI GLRCQENDPY KRPFISDILC
301: DFTNMEGANE QFSSNNGSTI DEISAYLEDD MLGIEPLELH FPFDLNKQMA CSLQLTNETD GCIAFNIQTT SPLPYCVHPT RDIVPPRSKC SIDITLQLHT
401: KAPWHAGGLI IRNTKVSDGL AAEDITTYMF DKEAGNLVDE VSLDVVFDRQ LQAPHLSEVP KHTSLAPVAV LGTNDPRNQG ASNVPRLSAH AGSEGTVSEV
501: IPAGSSKILD IHPPELWFTF EPNKLIPCSL YLTNYTDEYV PFKLMEKSML MDKRRLFLSL PLYGIVPPSS TYILVVTTDK RENLPEERDV DFVLQNSVGD
601: ERLKPFRNQY DCDQYFEKAT KSGNMVHNVI LKVVYAPEGK TACEAIPPLL KMTFVEKTHA ALCSLDANQT EPWIITGHYD GRVGLWDYDT QKFLALVKVT
701: GSSGCLVKFI ERRQWFLAGS YHEGFIHVYN YETEVQEVNS FRAHDRFLES MAIHPTQPYV LSSSDTQIKL WDWDKDWECR RTFMEHSHTV KQVAFNPWNT
801: NSFASASRDH TAKVWSLDSS RSMYTLSGHL DEVNCLDFFT RDNQQYLITG SEDMTAKIWD LRKEMCIETL KGFMFPVVSI VSHPRLPLVI IGTRNGIVHL
901: WSLTNFRLER ILHIGCHQGV RGLAALMGSR RLSLDMVQQY QWWRSIMKNL LIARPKWKSD MSDKDDHSV
101: IKIEGKKEYI YAEIRERLLC FEYVSNGNLQ NYITDELRGL EWNVRFQIIK DICEGLFHLH MENHIIHMDL KPANILLDHH MVPKVTDFGL SRLDENSQTM
201: CANRFLSLGY CAPEYLHSGR MSVKSDIYSL GVIIIELVTG HKSIPGNNNV SVVRRWRHRW KKSGNEMPLG YEQVTKCIEI GLRCQENDPY KRPFISDILC
301: DFTNMEGANE QFSSNNGSTI DEISAYLEDD MLGIEPLELH FPFDLNKQMA CSLQLTNETD GCIAFNIQTT SPLPYCVHPT RDIVPPRSKC SIDITLQLHT
401: KAPWHAGGLI IRNTKVSDGL AAEDITTYMF DKEAGNLVDE VSLDVVFDRQ LQAPHLSEVP KHTSLAPVAV LGTNDPRNQG ASNVPRLSAH AGSEGTVSEV
501: IPAGSSKILD IHPPELWFTF EPNKLIPCSL YLTNYTDEYV PFKLMEKSML MDKRRLFLSL PLYGIVPPSS TYILVVTTDK RENLPEERDV DFVLQNSVGD
601: ERLKPFRNQY DCDQYFEKAT KSGNMVHNVI LKVVYAPEGK TACEAIPPLL KMTFVEKTHA ALCSLDANQT EPWIITGHYD GRVGLWDYDT QKFLALVKVT
701: GSSGCLVKFI ERRQWFLAGS YHEGFIHVYN YETEVQEVNS FRAHDRFLES MAIHPTQPYV LSSSDTQIKL WDWDKDWECR RTFMEHSHTV KQVAFNPWNT
801: NSFASASRDH TAKVWSLDSS RSMYTLSGHL DEVNCLDFFT RDNQQYLITG SEDMTAKIWD LRKEMCIETL KGFMFPVVSI VSHPRLPLVI IGTRNGIVHL
901: WSLTNFRLER ILHIGCHQGV RGLAALMGSR RLSLDMVQQY QWWRSIMKNL LIARPKWKSD MSDKDDHSV
001: MPLRLEIKRK FAQRSERVKS VDLHPTEPWI LASLYSGTLC IWNYQTQTMV KSFDVTELPV RSAKFIARKQ WVVAGADDMF IRVYNYNTMD KIKVFEAHAD
101: YIRCVAVHPT LPYVLSSSDD MLIKLWDWEK GWLCTQIFEG HSHYVMQVTF NPKDTNTFAS ASLDRTIKIW NLGSPDPNFT LDAHLKGVNC VDYFTGGDKP
201: YLITGSDDHT AKVWDYQTKS CVQTLEGHTH NVSAVSFHPE LPIIITGSED GTVRIWHATT YRLENTLNYG LERVWAIGHI KGSRRVVIGY DEGSIMVKLG
301: REIPVASMDN SGKIIWAKHN EIHTVNIKSV GADEVTDGER LPLAVKELGT CDLYPQSLKH NPNGRFVVVC GDGEYIIYTA LAWRNRSFGS ALEFVWSSDG
401: EHAVRESSTK IKIFSKNFQE KKTVRPTFSA EHIFGGTLLT MCSSDFICFY DWAECRLIRR IDVTVKNLYW ADSGDLVAIA SDTSFYILKF NRDIVSSYFD
501: GGKQIDEEGI EDAFELLNET NERVRTGLWV GDCFIYTNSS WRLNYCVGGE VTTMYHLDRP MYLLGYLANQ SRVYLIDKEF NVIGYTLLLS LIEYKTLVMR
601: GDLEQANEVL PSIPKEHHNS VAHFLESRGM TEDALEVATD PDYRFELAIQ LGRLAVAKDI AVEAQNESKW KQLGELAMSS GKLDMAEECM RHAMDLSGLL
701: LLYSSLGDAD GMMKLAALAK EQGKNNVAFL CLFMLGQVED CLHLLVESNR IPEAALMARS YLPSKVSEIV ALWRNDLTKI SPKAAESLAD PEEYPNLFEE
801: WQVALSLENR AAETRGVHPP AGDYCSHADR DHTTLVDAFR IMQIEEEGRL EQGDVLDEVG EEGEDGEEEE EEDRQEESSD GRQQNVEEEA VVVDADSTDG
901: AVLVNGNESE EQWVLTPPQE
101: YIRCVAVHPT LPYVLSSSDD MLIKLWDWEK GWLCTQIFEG HSHYVMQVTF NPKDTNTFAS ASLDRTIKIW NLGSPDPNFT LDAHLKGVNC VDYFTGGDKP
201: YLITGSDDHT AKVWDYQTKS CVQTLEGHTH NVSAVSFHPE LPIIITGSED GTVRIWHATT YRLENTLNYG LERVWAIGHI KGSRRVVIGY DEGSIMVKLG
301: REIPVASMDN SGKIIWAKHN EIHTVNIKSV GADEVTDGER LPLAVKELGT CDLYPQSLKH NPNGRFVVVC GDGEYIIYTA LAWRNRSFGS ALEFVWSSDG
401: EHAVRESSTK IKIFSKNFQE KKTVRPTFSA EHIFGGTLLT MCSSDFICFY DWAECRLIRR IDVTVKNLYW ADSGDLVAIA SDTSFYILKF NRDIVSSYFD
501: GGKQIDEEGI EDAFELLNET NERVRTGLWV GDCFIYTNSS WRLNYCVGGE VTTMYHLDRP MYLLGYLANQ SRVYLIDKEF NVIGYTLLLS LIEYKTLVMR
601: GDLEQANEVL PSIPKEHHNS VAHFLESRGM TEDALEVATD PDYRFELAIQ LGRLAVAKDI AVEAQNESKW KQLGELAMSS GKLDMAEECM RHAMDLSGLL
701: LLYSSLGDAD GMMKLAALAK EQGKNNVAFL CLFMLGQVED CLHLLVESNR IPEAALMARS YLPSKVSEIV ALWRNDLTKI SPKAAESLAD PEEYPNLFEE
801: WQVALSLENR AAETRGVHPP AGDYCSHADR DHTTLVDAFR IMQIEEEGRL EQGDVLDEVG EEGEDGEEEE EEDRQEESSD GRQQNVEEEA VVVDADSTDG
901: AVLVNGNESE EQWVLTPPQE
Arabidopsis Description
Coatomer subunit beta' [Source:UniProtKB/TrEMBL;Acc:A0A178WGE9]
SUBAcon: [cytosol,nucleus,plasma membrane,mitochondrion]
SUBAcon: [cytosol,nucleus,plasma membrane,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.