Factsheet for TraesCS7B01G463000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G541400.1	Wheat	cytosol	83.74	87.72
TraesCS7B01G460100.2	Wheat	cytosol	30.54	63.52
TraesCS3B01G574400.1	Wheat	cytosol	16.26	62.03
TraesCS7B01G459800.1	Wheat	cytosol	30.34	59.92
TraesCS7B01G460600.1	Wheat	cytosol	37.83	55.9
TraesCS7B01G460400.1	Wheat	cytosol	43.74	55.57
TraesCS3B01G103500.2	Wheat	cytosol	30.34	55.4
TraesCS7B01G461000.2	Wheat	cytosol	46.11	54.99
TraesCS6B01G013900.1	Wheat	cytosol	7.68	54.93
TraesCS7B01G002600.1	Wheat	cytosol	23.74	54.04
TraesCS6B01G001300.1	Wheat	cytosol, nucleus, plasma membrane	23.35	50.53
TraesCS7B01G462400.1	Wheat	cytosol	30.34	50.33
TraesCS2B01G100300.1	Wheat	cytosol	21.87	47.44
TraesCS4B01G372400.1	Wheat	cytosol	22.17	42.21
TraesCS7B01G459900.1	Wheat	cytosol	33.6	39.51
TraesCS7B01G462600.1	Wheat	cytosol	33.2	39.05
Zm00001d048612_P001	Maize	cytosol	26.5	37.99
TraesCS2B01G385700.2	Wheat	cytosol	8.37	34.14
TraesCS6B01G266100.1	Wheat	cytosol, golgi, plasma membrane	7.49	33.33
TraesCS2B01G025500.1	Wheat	cytosol	31.82	33.2
TraesCS7B01G201800.1	Wheat	cytosol, golgi, plasma membrane	7.09	30.25
TraesCS3B01G611100.1	Wheat	cytosol	22.56	29.7
TraesCS2B01G036500.1	Wheat	cytosol	4.14	28.19
TraesCS1B01G204400.1	Wheat	cytosol	7.0	25.91
TraesCS2B01G430600.1	Wheat	cytosol, plastid	6.01	25.21
TraesCS6B01G277000.1	Wheat	cytosol	5.71	24.79
TraesCS6B01G282300.1	Wheat	cytosol, golgi, plasma membrane	5.42	23.71
TraesCS6B01G008300.1	Wheat	cytosol	5.32	20.69
TraesCS4B01G343200.1	Wheat	cytosol	27.98	20.16
TraesCS6B01G008400.1	Wheat	cytosol	28.47	18.89
TraesCS3B01G593500.1	Wheat	cytosol	26.21	18.68
TraesCS7B01G353800.1	Wheat	cytosol	28.08	16.61
TraesCS3B01G511900.2	Wheat	cytosol	5.81	16.25
TraesCS4B01G004000.1	Wheat	cytosol, peroxisome, plasma membrane	35.37	15.18
TraesCS2B01G214400.1	Wheat	mitochondrion	3.84	14.55

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.46	Gene3D:2.130.10.10	Gene3D:2.60.40.10	MapMan:20.7.1	InterPro:G-protein_beta_WD-40_rep
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000535	InterPro:IPR000719	InterPro:IPR001680
InterPro:IPR013783	InterPro:IPR015943	InterPro:IPR017986	InterPro:Ig-like_fold	InterPro:Kinase-like_dom_sf	InterPro:MSP_dom
PFAM:PF00069	PFAM:PF00400	PFAM:PF00635	PRINTS:PR00320	ScanProsite:PS00107	ScanProsite:PS00108
ScanProsite:PS00678	PFscan:PS50011	PFscan:PS50082	PFscan:PS50202	PFscan:PS50294	PANTHER:PTHR27002
PANTHER:PTHR27002:SF225	InterPro:PapD-like_sf	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00320
SUPFAM:SSF49354	SUPFAM:SSF50978	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS7B01G463000	EnsemblPlants:TraesCS7B01G463000.1
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	TIGR:cd00200

Description

No Description!

Coordinates

chr7B:+:720067596..720076035

Molecular Weight (calculated)

115437.0 Da

IEP (calculated)

5.969

GRAVY (calculated)

-0.294

Length

1015 amino acids

Sequence
(BLAST)

0001: MFLRLFKTPR SHESLIIPGT RNPFTQYSES GCYRVVYMEY DMLEHILEGK EKPTNLPFAL LKKITDDFSQ EREIGQGGFG TVYKGVLRNG NVAVKRIMSN
0101: YTIDEKLFYR EVNSLLKVNH KNVVRFLGFC ANTEQVAIKI EGKREYIYAE IRERLLCFEY ISNGNLQNYI TDELRGLEWN VRFQIIKDIC EGLYHLHMEN
0201: HIIHMDLKPA NILLDHHMVP KVTDFGLSRL DENSQTMCAN RFLSLGYCAP EYLHGGRMSV KSDIYSLGVI IIELVTGHKS ILDNNNSVLR RWRHRWKKSG
0301: KETPLGYRQV TKCIEIGMRC QENDPYRRPF IGDILCDFID MEGTNGQFSS DNGSTIDEIS PYLEDDMLGI EPLELHFPFD LNKQMSCSIQ LTNETDGCIA
0401: FNIQTTSPLP YCAHPTKDIV PPRSKCSIDI TLQLQKNAPR HAGGLIVRST KVSDGLAARD ITTDMFNKEA GNLVDEVSLD VVFDGELQAP CSSEVCLSEV
0501: PKHSSLAPVA VLGMDDPSNP EASNVPQSSA HAGSEGTDSE VIPAGSNKLL DIHPPELWFT FEPNKLIPCS LHLTNNTNEY VPFKLMEKSR LMDKRRCFLS
0601: LPLYGIVPPS SIYILVVTTD KRENLPEERD VNFVLQSSIG DEGLKPFRNQ YDCDEYFEKA AESGHMVHDV TLKVVYAPKR ETACEAIPPL LKITFVEKTH
0701: AALCSLDANQ TEPWIITGHY DGRVGLWDYD TQKFLALVKV SGSSGCLVKF IERRQWFLAG SYHEGFIHVY SYETEVQEVN SFRAHDKFLE SMAIHPTQPY
0801: VLSSCDTQIK LWDWDMDWEC RRTFIEHSHT VKQIAFNPWN TNSFASASRD HTVKVWSLDS SRSMCTLSGH SDEVNCLDFF MRDNQQYLIT GSEDMTAKIW
0901: DLQKEMCIET LKGFMFPVVS IVSHPRLPLV IIGTRNGIVH LWSLSNFRLE RILHIGCHQG VRGLAALMGS TRVIIGHGSA VSMVEIHDEE PVDSKAEMEV
1001: QYERQGRSFG MTDAY

Best Arabidopsis Sequence Match ( AT3G15980.1 )
(BLAST)

001: MPLRLDIKRK FAQRSERVKS VDLHPTEPWI LASLYSGTVC IWNYQTQTIT KSFEVTELPV RSAKFIPRKQ WVVAGADDMY IRVYNYNTMD KVKVFEAHSD
101: YIRCVAVHPT LPYVLSSSDD MLIKLWDWEN GWACTQIFEG HSHYVMQVVF NPKDTNTFAS ASLDRTIKIW NLGSPDPNFT LDAHQKGVNC VDYFTGGDKP
201: YLITGSDDHT AKVWDYQTKS CVQTLDGHTH NVSAVCFHPE LPIIITGSED GTVRIWHATT YRLENTLNYG LERVWAIGYI KSSRRVVIGY DEGTIMVKLG
301: REIPVASMDS SGKIIWAKHN EIQTANIKSI GAGYEATDGE RLPLSVKELG TCDLYPQSLK HNPNGRFVVV CGDGEYIIYT ALAWRNRSFG SGLEFVWSSE
401: GECAVRESSS KIKIFSKNFQ ERKSIRPTFS AEKIFGGTLL AMCSNDFICF YDWAECRLIQ QIDVTVKNLY WAESGDLVAI ASDTSFYILK YNRELVSSHF
501: DSGRPTDEEG VEDAFEVLHE NDERVRTGIW VGDCFIYNNS SWKLNYCVGG EVTTMYHLDR PMYLLGYIAN QSRVYLVDKE FNVIGYTLLL SLIEYKTLVM
601: RGDLDRANQI LPTIPKEQHN NVAHFLESRG MIEDALEIAT DPDYKFDLAI QLGRLEIAKE IAEEVQSESK WKQLGELAMS SGKLQLAEDC MKYAMDLSGL
701: LLLYSSLGDA EGVSKLACLA KEQGKNNVAF LCLFTLGRLE DCLQLLVESN RIPEAALMAR SYLPSKVSEI VALWREDLSK VNPKAAESLA DPEEYSNLFE
801: DWQVALSVEA NTAETRGVYT AAENYPSHAD KPSITLVEAF RNLQVEAEES LENGNIDHEV AEENGHVENE GDEEEQQEEE VNEEEGVVDA DSTDGAVLVN
901: GSEVLTPHP

Arabidopsis Description

Coatomer subunit beta' [Source:UniProtKB/TrEMBL;Acc:F4J1E5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.