Factsheet for TraesCS6B01G008300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU79125	Sorghum	cytosol	41.0	55.73
TraesCS2B01G036500.1	Wheat	cytosol	25.29	44.3
TraesCS6B01G266100.1	Wheat	cytosol, golgi, plasma membrane	23.37	26.75
TraesCS2B01G385700.2	Wheat	cytosol	22.22	23.29
TraesCS7B01G201800.1	Wheat	cytosol, golgi, plasma membrane	20.31	22.27
TraesCS6B01G277000.1	Wheat	cytosol	17.24	19.23
TraesCS2B01G430600.1	Wheat	cytosol, plastid	17.62	19.01
TraesCS6B01G282300.1	Wheat	cytosol, golgi, plasma membrane	16.86	18.97
TraesCS1B01G204400.1	Wheat	cytosol	18.77	17.88
TraesCS2B01G214400.1	Wheat	mitochondrion	12.64	12.31
TraesCS6B01G001300.1	Wheat	cytosol, nucleus, plasma membrane	21.84	12.15
TraesCS3B01G511900.2	Wheat	cytosol	16.09	11.57
TraesCS4B01G372400.1	Wheat	cytosol	22.99	11.26
TraesCS7B01G460100.2	Wheat	cytosol	20.69	11.07
TraesCS7B01G459800.1	Wheat	cytosol	20.69	10.51
TraesCS7B01G002600.1	Wheat	cytosol	17.62	10.31
TraesCS2B01G100300.1	Wheat	cytosol	18.39	10.26
TraesCS3B01G103500.2	Wheat	cytosol	21.07	9.89
TraesCS7B01G462400.1	Wheat	cytosol	18.39	7.84
TraesCS7B01G461000.2	Wheat	cytosol	22.22	6.82
TraesCS3B01G611100.1	Wheat	cytosol	19.92	6.74
TraesCS7B01G460400.1	Wheat	cytosol	20.31	6.63
TraesCS7B01G459900.1	Wheat	cytosol	21.07	6.37
TraesCS7B01G462600.1	Wheat	cytosol	20.69	6.26
TraesCS2B01G025500.1	Wheat	cytosol	20.31	5.45
TraesCS7B01G463000.1	Wheat	mitochondrion	20.69	5.32
TraesCS3B01G593500.1	Wheat	cytosol	24.14	4.42
TraesCS7B01G460600.1	Wheat	cytosol	10.34	3.93
TraesCS4B01G343200.1	Wheat	cytosol	18.39	3.41
TraesCS6B01G013900.1	Wheat	cytosol	1.53	2.82
TraesCS6B01G008400.1	Wheat	cytosol	16.48	2.81
TraesCS7B01G353800.1	Wheat	cytosol	17.62	2.68
TraesCS3B01G574400.1	Wheat	cytosol	2.68	2.63
TraesCS4B01G004000.1	Wheat	cytosol, peroxisome, plasma membrane	21.07	2.33

Protein Annotations

Gene3D:1.10.510.10	Gene3D:2.60.40.10	MapMan:20.7.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000535	InterPro:IPR000719	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Kinase-like_dom_sf	InterPro:MSP_dom
PFAM:PF00069	PFAM:PF00635	PFscan:PS50011	PFscan:PS50202	PANTHER:PTHR27002	PANTHER:PTHR27002:SF153
InterPro:PapD-like_sf	InterPro:Prot_kinase_dom	SUPFAM:SSF49354	SUPFAM:SSF56112	EnsemblPlantsGene:TraesCS6B01G008300	EnsemblPlants:TraesCS6B01G008300.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:5365598..5367070

Molecular Weight (calculated)

29285.0 Da

IEP (calculated)

5.244

GRAVY (calculated)

-0.379

Length

261 amino acids

Sequence
(BLAST)

001: MPPEYIDEFD ISSKFDVYSL GAIIIGIMDG ENGHSHFSEM GAEKFTGNVI ANWDRSLAGP STSSYSSKKE DILRVKTCVK IALRCVETDK NKRPSPKDIV
101: QELEKLELEI KKMSLHSDKS EDRIGPTSSG CSTVLSLDPS QELRFLFEPR MNASTCLQLT NMTEDFIAFN IKTNKRKYCA QPNTGVMAPC SKRYVSVTLK
201: AQVEAPLRMQ CDDMFVVQSA RVNEDLKFDK IPDEFLDEGK VDTVKLPIVY VGATQFPRSD V

Best Arabidopsis Sequence Match ( AT4G00170.1 )
(BLAST)

001: MTTGDLVNIH PTELKFPFEL KKQSSCSMQL TNKTTTQCVA FKVKTTNPRK YCVRPNTGVV LPGDSCNVTV TMQAQKEAPL DMQCKDKFLV QTVVVSDGTT
101: SKEVLAEMFN KEAGRVIEDF KLRVVYIPAN PPSPVPEGSE EGNSPMASLN DIASQSASLF DDVSRTFEET SEKSSEAWSM ISKLTEEKTS ATQQSQKLRL
201: ELEMLRKETS KKQSGGHSLL LMLLVGLLGC VIGYLLNRI

Arabidopsis Description

PVA13Vesicle-associated protein 1-3 [Source:UniProtKB/Swiss-Prot;Acc:Q84WW5]
SUBAcon: [peroxisome,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.