Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G163100.1 | Wheat | cytosol | 94.89 | 94.89 |
| Os10t0507600-01 | Rice | cytosol, plasma membrane | 65.69 | 75.0 |
| EER91402 | Sorghum | cytosol | 71.17 | 71.69 |
| Zm00001d032507_P001 | Maize | cytosol, golgi, plasma membrane | 69.34 | 70.11 |
| TraesCS2B01G385700.2 | Wheat | cytosol | 44.53 | 49.0 |
| TraesCS7B01G201800.1 | Wheat | cytosol, golgi, plasma membrane | 42.34 | 48.74 |
| TraesCS6B01G266100.1 | Wheat | cytosol, golgi, plasma membrane | 40.51 | 48.68 |
| TraesCS6B01G277000.1 | Wheat | cytosol | 32.85 | 38.46 |
| TraesCS6B01G282300.1 | Wheat | cytosol, golgi, plasma membrane | 32.12 | 37.93 |
| TraesCS2B01G430600.1 | Wheat | cytosol, plastid | 32.48 | 36.78 |
| TraesCS2B01G036500.1 | Wheat | cytosol | 17.15 | 31.54 |
| TraesCS3B01G511900.2 | Wheat | cytosol | 35.4 | 26.72 |
| TraesCS6B01G008300.1 | Wheat | cytosol | 17.88 | 18.77 |
| TraesCS2B01G214400.1 | Wheat | mitochondrion | 17.52 | 17.91 |
| TraesCS7B01G459800.1 | Wheat | cytosol | 19.71 | 10.51 |
| TraesCS7B01G460100.2 | Wheat | cytosol | 18.25 | 10.25 |
| TraesCS3B01G103500.2 | Wheat | cytosol | 19.34 | 9.53 |
| TraesCS7B01G002600.1 | Wheat | cytosol | 14.23 | 8.74 |
| TraesCS4B01G372400.1 | Wheat | cytosol | 16.79 | 8.63 |
| TraesCS6B01G001300.1 | Wheat | cytosol, nucleus, plasma membrane | 14.6 | 8.53 |
| TraesCS7B01G460400.1 | Wheat | cytosol | 24.45 | 8.39 |
| TraesCS2B01G100300.1 | Wheat | cytosol | 13.87 | 8.12 |
| TraesCS7B01G461000.2 | Wheat | cytosol | 24.82 | 7.99 |
| TraesCS3B01G611100.1 | Wheat | cytosol | 21.9 | 7.78 |
| TraesCS7B01G462400.1 | Wheat | cytosol | 16.79 | 7.52 |
| TraesCS7B01G463000.1 | Wheat | mitochondrion | 25.91 | 7.0 |
| TraesCS7B01G459900.1 | Wheat | cytosol | 20.44 | 6.49 |
| TraesCS7B01G462600.1 | Wheat | cytosol | 20.44 | 6.49 |
| TraesCS3B01G593500.1 | Wheat | cytosol | 29.2 | 5.62 |
| TraesCS2B01G025500.1 | Wheat | cytosol | 19.34 | 5.45 |
| TraesCS7B01G460600.1 | Wheat | cytosol | 12.77 | 5.09 |
| TraesCS4B01G343200.1 | Wheat | cytosol | 22.63 | 4.4 |
| TraesCS6B01G008400.1 | Wheat | cytosol | 23.36 | 4.18 |
| TraesCS7B01G353800.1 | Wheat | cytosol | 20.8 | 3.32 |
| TraesCS4B01G004000.1 | Wheat | cytosol, peroxisome, plasma membrane | 23.72 | 2.75 |
| TraesCS3B01G574400.1 | Wheat | cytosol | 0.36 | 0.38 |
| TraesCS6B01G013900.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCSU01G255000.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:20.7.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 | InterPro:IPR000535 | InterPro:IPR013783 |
| InterPro:Ig-like_fold | InterPro:MSP_dom | PFAM:PF00635 | PIRSF:PIRSF019693 | PFscan:PS50202 | PANTHER:PTHR10809 |
| PANTHER:PTHR10809:SF47 | InterPro:PapD-like_sf | SUPFAM:SSF49354 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS1B01G204400 | EnsemblPlants:TraesCS1B01G204400.1 |
| InterPro:VAP | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:368540349..368544221
Molecular Weight (calculated)
29975.3 Da
IEP (calculated)
7.860
GRAVY (calculated)
-0.201
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASSDLLDV DPPELQFPFE LDKQISCPLK MINKTDRTVA FKVKTTTPKK YCVRPNNGVV RPRSTCEVVV TMQAQTVAPP DLQCKDKFLV QSVVVADRLS
101: AKDITPQMFM KQGGNAVEEV RMRVTYVMPT ESSLEIAEES DGPQRILVPM QRIADHGRSA SELSSGSVSL RSAELGTEVG SPTGPVVRTE ELLRAAGHAA
201: ETRTYTGPDA QSLELSALIT KLTKEKDSAL EQNKKLHSEL ELVRRDASKQ GGFSLIFVLV CGLLSIILGY LVKK
101: AKDITPQMFM KQGGNAVEEV RMRVTYVMPT ESSLEIAEES DGPQRILVPM QRIADHGRSA SELSSGSVSL RSAELGTEVG SPTGPVVRTE ELLRAAGHAA
201: ETRTYTGPDA QSLELSALIT KLTKEKDSAL EQNKKLHSEL ELVRRDASKQ GGFSLIFVLV CGLLSIILGY LVKK
001: MSNELLTIDP VDLQFPFELK KQISCSLYLG NKTDNYVAFK VKTTNPKKYC VRPNTGVVHP RSSSEVLVTM QAQKEAPADL QCKDKFLLQC VVASPGATPK
101: DVTHEMFSKE AGHRVEETKL RVVYVAPPRP PSPVREGSEE GSSPRASVSD NGNASDFTAA PRFSADRVDA QDNSSEARAL VTKLTEEKNS AVQLNNRLQQ
201: ELDQLRRESK RSKSGGIPFM YVLLVGLIGL ILGYIMKRT
101: DVTHEMFSKE AGHRVEETKL RVVYVAPPRP PSPVREGSEE GSSPRASVSD NGNASDFTAA PRFSADRVDA QDNSSEARAL VTKLTEEKNS AVQLNNRLQQ
201: ELDQLRRESK RSKSGGIPFM YVLLVGLIGL ILGYIMKRT
Arabidopsis Description
PVA12Vesicle-associated protein 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHC8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.