Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G024800.2 | Wheat | cytosol, nucleus, plastid | 88.59 | 88.59 |
| HORVU2Hr1G003640.7 | Barley | cytosol | 64.43 | 45.71 |
| OQU79125 | Sorghum | cytosol | 51.01 | 39.58 |
| TraesCS6B01G008300.1 | Wheat | cytosol | 44.3 | 25.29 |
| TraesCS6B01G266100.1 | Wheat | cytosol, golgi, plasma membrane | 35.57 | 23.25 |
| TraesCS2B01G385700.2 | Wheat | cytosol | 36.24 | 21.69 |
| TraesCS7B01G201800.1 | Wheat | cytosol, golgi, plasma membrane | 33.56 | 21.01 |
| TraesCS2B01G430600.1 | Wheat | cytosol, plastid | 28.86 | 17.77 |
| TraesCS6B01G282300.1 | Wheat | cytosol, golgi, plasma membrane | 27.52 | 17.67 |
| TraesCS6B01G277000.1 | Wheat | cytosol | 27.52 | 17.52 |
| TraesCS1B01G204400.1 | Wheat | cytosol | 31.54 | 17.15 |
| TraesCS2B01G214400.1 | Wheat | mitochondrion | 21.48 | 11.94 |
| TraesCS3B01G511900.2 | Wheat | cytosol | 25.5 | 10.47 |
| TraesCS7B01G460100.2 | Wheat | cytosol | 30.2 | 9.22 |
| TraesCS6B01G001300.1 | Wheat | cytosol, nucleus, plasma membrane | 26.17 | 8.32 |
| TraesCS7B01G459800.1 | Wheat | cytosol | 28.19 | 8.17 |
| TraesCS2B01G100300.1 | Wheat | cytosol | 25.5 | 8.12 |
| TraesCS3B01G103500.2 | Wheat | cytosol | 30.2 | 8.09 |
| TraesCS7B01G002600.1 | Wheat | cytosol | 23.49 | 7.85 |
| TraesCS4B01G372400.1 | Wheat | cytosol | 27.52 | 7.69 |
| TraesCS7B01G462400.1 | Wheat | cytosol | 26.17 | 6.37 |
| TraesCS7B01G460400.1 | Wheat | cytosol | 28.86 | 5.38 |
| TraesCS3B01G611100.1 | Wheat | cytosol | 27.52 | 5.32 |
| TraesCS7B01G461000.2 | Wheat | cytosol | 28.19 | 4.94 |
| TraesCS7B01G459900.1 | Wheat | cytosol | 26.85 | 4.63 |
| TraesCS7B01G462600.1 | Wheat | cytosol | 26.17 | 4.52 |
| TraesCS7B01G463000.1 | Wheat | mitochondrion | 28.19 | 4.14 |
| TraesCS2B01G025500.1 | Wheat | cytosol | 25.5 | 3.91 |
| TraesCS3B01G593500.1 | Wheat | cytosol | 27.52 | 2.88 |
| TraesCS4B01G343200.1 | Wheat | cytosol | 26.17 | 2.77 |
| TraesCS7B01G460600.1 | Wheat | cytosol | 11.41 | 2.47 |
| TraesCS6B01G008400.1 | Wheat | cytosol | 23.49 | 2.29 |
| TraesCS7B01G353800.1 | Wheat | cytosol | 24.83 | 2.16 |
| TraesCS4B01G004000.1 | Wheat | cytosol, peroxisome, plasma membrane | 27.52 | 1.73 |
| TraesCS3B01G574400.1 | Wheat | cytosol | 1.34 | 0.75 |
| TraesCS6B01G013900.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G036500.1 | EnsemblPlantsGene:TraesCS2B01G036500 | Gene3D:2.60.40.10 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 | InterPro:IPR000535 | InterPro:IPR013783 |
| InterPro:Ig-like_fold | InterPro:MSP_dom | InterPro:PapD-like_sf | InterPro:VAP | PANTHER:PTHR10809 | PANTHER:PTHR10809:SF87 |
| PFAM:PF00635 | PFscan:PS50202 | SUPFAM:SSF49354 | MapMan:20.7.1 | : | : |
Description
No Description!
Coordinates
chr2B:-:17368088..17368644
Molecular Weight (calculated)
16813.3 Da
IEP (calculated)
6.489
GRAVY (calculated)
-0.154
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLASNVSND ATVQRSCDTN IISVHPSLEL RFVFEPRKET SCCLQIMNKT NSIIAFNIKI NQNKYSVRPS QGTMPPCSCR YVIVKLQAQE AVPPNMRCHD
101: MLFVQNTGIT QDLASRDGEI DYLELFEKAM ADKVVDVVRL PIVYVTPEQ
101: MLFVQNTGIT QDLASRDGEI DYLELFEKAM ADKVVDVVRL PIVYVTPEQ
001: MTTGDLVNIH PTELKFPFEL KKQSSCSMQL TNKTTTQCVA FKVKTTNPRK YCVRPNTGVV LPGDSCNVTV TMQAQKEAPL DMQCKDKFLV QTVVVSDGTT
101: SKEVLAEMFN KEAGRVIEDF KLRVVYIPAN PPSPVPEGSE EGNSPMASLN DIASQSASLF DDVSRTFEET SEKSSEAWSM ISKLTEEKTS ATQQSQKLRL
201: ELEMLRKETS KKQSGGHSLL LMLLVGLLGC VIGYLLNRI
101: SKEVLAEMFN KEAGRVIEDF KLRVVYIPAN PPSPVPEGSE EGNSPMASLN DIASQSASLF DDVSRTFEET SEKSSEAWSM ISKLTEEKTS ATQQSQKLRL
201: ELEMLRKETS KKQSGGHSLL LMLLVGLLGC VIGYLLNRI
Arabidopsis Description
PVA13Vesicle-associated protein 1-3 [Source:UniProtKB/Swiss-Prot;Acc:Q84WW5]
SUBAcon: [peroxisome,golgi,plastid,cytosol]
SUBAcon: [peroxisome,golgi,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.