Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G024800.2 | Wheat | cytosol, nucleus, plastid | 45.71 | 64.43 |
| TraesCS2B01G036500.1 | Wheat | cytosol | 45.71 | 64.43 |
| OQU79125 | Sorghum | cytosol | 48.57 | 53.12 |
| HORVU6Hr1G060760.3 | Barley | cytosol, golgi, plasma membrane | 26.67 | 24.56 |
| HORVU2Hr1G091830.4 | Barley | cytosol | 24.29 | 20.48 |
| HORVU0Hr1G021390.2 | Barley | cytosol, golgi, plasma membrane | 22.86 | 20.17 |
| HORVU6Hr1G063580.1 | Barley | cytosol | 19.05 | 17.09 |
| HORVU2Hr1G097220.19 | Barley | plastid | 18.57 | 15.79 |
| HORVU7Hr1G071270.2 | Barley | mitochondrion | 21.9 | 15.59 |
| HORVU6Hr1G062050.9 | Barley | mitochondrion | 17.62 | 12.71 |
| HORVU3Hr1G099730.5 | Barley | cytosol | 18.1 | 10.11 |
| HORVU3Hr1G006600.1 | Barley | cytosol | 21.9 | 6.47 |
| HORVU5Hr1G012420.3 | Barley | nucleus | 20.48 | 4.36 |
| HORVU6Hr1G011350.2 | Barley | cytosol | 1.9 | 0.32 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:20.7.1 | UniProt:A0A287GXF8 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 | EnsemblPlantsGene:HORVU2Hr1G003640 |
| EnsemblPlants:HORVU2Hr1G003640.7 | InterPro:IPR000535 | InterPro:IPR013783 | InterPro:Ig-like_fold | InterPro:MSP_dom | PFAM:PF00635 |
| PFscan:PS50202 | PANTHER:PTHR10809 | PANTHER:PTHR10809:SF87 | InterPro:PapD-like_sf | SUPFAM:SSF49354 | UniParc:UPI000B470400 |
| InterPro:VAP | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:8567093..8572900
Molecular Weight (calculated)
23760.1 Da
IEP (calculated)
6.967
GRAVY (calculated)
-0.149
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MERCKVRENW MKKLQAKPGY SSQEIDILGV TSCVEVAVKC VDMDRSKRPC IQQIVHELEE LEAKLKTISL APDVSKTVQR SCDTNILSVD PTMEVRFLFE
101: LRKEASCCLQ LTNKTGGFIA FNILINENNY IVRPSQGTIP PCSRRYVVVM LRAKEAAPPY MRCDDMLLVQ STGVSQDLGD MNYRELFKTA MGNEVVDVVK
201: LPIAYVTLDQ
101: LRKEASCCLQ LTNKTGGFIA FNILINENNY IVRPSQGTIP PCSRRYVVVM LRAKEAAPPY MRCDDMLLVQ STGVSQDLGD MNYRELFKTA MGNEVVDVVK
201: LPIAYVTLDQ
001: MSNNELLEIE PMYLQFPFEL KKQMSCSLYL TNKTDNNVAF KVKTTNRNNY CVRPNYGLIL PKSTCKVLVT MQAQKEVPSD MQSFEKFMIQ SVLASPGVTA
101: KEVTREMFSK ESGHVVEETK LRVTYVCSTT TNITSSPRTR RGFIFQCFC
101: KEVTREMFSK ESGHVVEETK LRVTYVCSTT TNITSSPRTR RGFIFQCFC
Arabidopsis Description
PVA31Vesicle-associated protein 3-1 [Source:UniProtKB/Swiss-Prot;Acc:O82213]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.