Factsheet for HORVU2Hr1G097220.19

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 1
nucleus 1
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
Predotar:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G430600.1	Wheat	cytosol, plastid	79.76	81.41
TraesCS2A01G412000.1	Wheat	cytosol, plastid	79.35	80.99
TraesCS2D01G409200.1	Wheat	cytosol, plastid	78.54	80.17
Os04t0554200-02	Rice	cytosol, nucleus, plastid	59.92	60.66
KXG26858	Sorghum	cytosol, plastid	55.87	56.56
HORVU6Hr1G063580.1	Barley	cytosol	44.94	47.44
GSMUA_Achr1P04220_001	Banana	cytosol, nucleus, plasma membrane	44.94	46.64
GSMUA_Achr7P07100_001	Banana	cytosol	44.53	46.22
PGSC0003DMT400066797	Potato	cytosol	42.91	44.17
Solyc01g090990.2.1	Tomato	nucleus, plastid, unclear	42.51	43.75
Bra000978.1-P	Field mustard	cytosol	41.3	43.22
CDX91914	Canola	cytosol	41.3	43.22
AT4G00170.1	Thale cress	cytosol, golgi, peroxisome, plastid	41.7	43.1
CDX74330	Canola	cytosol	40.89	42.8
VIT_15s0048g00600.t01	Wine grape	cytosol, nucleus, plasma membrane	40.49	41.84
HORVU0Hr1G021390.2	Barley	cytosol, golgi, plasma membrane	36.03	37.4
HORVU2Hr1G091830.4	Barley	cytosol	34.41	34.14
HORVU6Hr1G060760.3	Barley	cytosol, golgi, plasma membrane	30.36	32.89
HORVU7Hr1G071270.2	Barley	mitochondrion	35.63	29.83
Solyc08g007390.2.1	Tomato	unclear	21.05	25.87
HORVU6Hr1G062050.9	Barley	mitochondrion	25.51	21.65
HORVU3Hr1G099730.5	Barley	cytosol	31.17	20.48
HORVU2Hr1G003640.7	Barley	cytosol	15.79	18.57
HORVU3Hr1G006600.1	Barley	cytosol	14.98	5.2
HORVU5Hr1G012420.3	Barley	nucleus	16.19	4.06
HORVU6Hr1G011350.2	Barley	cytosol	0.81	0.16

Protein Annotations

Gene3D:2.60.40.10	MapMan:20.7.1	UniProt:A0A287J2B4	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	EnsemblPlantsGene:HORVU2Hr1G097220	EnsemblPlants:HORVU2Hr1G097220.19
InterPro:IPR000535	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:MSP_dom	PFAM:PF00635	PFscan:PS50202
PANTHER:PTHR10809	PANTHER:PTHR10809:SF54	InterPro:PapD-like_sf	SUPFAM:SSF49354	UniParc:UPI000B481CE0	InterPro:VAP
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:678148575..678151174

Molecular Weight (calculated)

27922.9 Da

IEP (calculated)

8.693

GRAVY (calculated)

-0.285

Length

247 amino acids

Sequence
(BLAST)

001: MSGTLLRVCP SELKIPYEVK RQRSCCMQLI NKTDMYVAFK VKTTNPRKYS VRHTCGILQP RSSCSVTVTM QAPRDMQMDH HCKDKFLVQS AVARDGATMR
101: DLVPELFTRA PGRLIEEFKL RVVYIAANPP SPVPEEAEEE DASPRSEAMM GYEAKVSSAF DAASRCIDNC GAKPSCTTKG ASVVSTLLGE QLYTREDNQK
201: KFQQDMVRPH SNDVIVYATF LSMLLLRWCS TMVLQIHTNL FFFMRGK

Best Arabidopsis Sequence Match ( AT2G45140.1 )
(BLAST)

001: MSNELLTIDP VDLQFPFELK KQISCSLYLG NKTDNYVAFK VKTTNPKKYC VRPNTGVVHP RSSSEVLVTM QAQKEAPADL QCKDKFLLQC VVASPGATPK
101: DVTHEMFSKE AGHRVEETKL RVVYVAPPRP PSPVREGSEE GSSPRASVSD NGNASDFTAA PRFSADRVDA QDNSSEARAL VTKLTEEKNS AVQLNNRLQQ
201: ELDQLRRESK RSKSGGIPFM YVLLVGLIGL ILGYIMKRT

Arabidopsis Description

PVA12Vesicle-associated protein 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHC8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.