Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
Predictors | GFP | MS/MS | Papers | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3B01G511900.2 | Wheat | cytosol | 92.82 | 96.14 |
TraesCS3D01G462100.3 | Wheat | cytosol | 92.29 | 95.59 |
TraesCS3A01G467600.2 | Wheat | cytosol | 92.29 | 95.59 |
EES04183 | Sorghum | cytosol | 67.29 | 67.11 |
Os01t0936800-01 | Rice | cytosol, plasma membrane | 65.96 | 65.26 |
Zm00001d011904_P001 | Maize | cytosol | 67.82 | 65.22 |
Zm00001d042180_P002 | Maize | cytosol | 66.49 | 62.34 |
GSMUA_Achr8P21990_001 | Banana | cytosol | 40.69 | 50.83 |
GSMUA_Achr3P08840_001 | Banana | cytosol | 30.32 | 47.5 |
GSMUA_Achr10P... | Banana | cytosol | 37.77 | 47.33 |
VIT_05s0020g01970.t01 | Wine grape | cytosol | 36.17 | 46.42 |
KRH50932 | Soybean | cytosol | 36.17 | 46.1 |
KRH02189 | Soybean | cytosol | 36.17 | 46.1 |
HORVU0Hr1G021390.2 | Barley | cytosol, golgi, plasma membrane | 28.46 | 44.96 |
VIT_14s0030g00730.t01 | Wine grape | cytosol | 40.16 | 44.94 |
HORVU6Hr1G060760.3 | Barley | cytosol, golgi, plasma membrane | 26.86 | 44.3 |
KRH11275 | Soybean | cytosol | 31.12 | 42.09 |
HORVU2Hr1G091830.4 | Barley | cytosol | 27.13 | 40.96 |
Solyc01g098200.2.1 | Tomato | cytosol | 33.24 | 39.56 |
PGSC0003DMT400057834 | Potato | cytosol | 33.24 | 39.56 |
PGSC0003DMT400027619 | Potato | cytosol | 36.7 | 38.87 |
HORVU7Hr1G071270.2 | Barley | mitochondrion | 27.93 | 35.59 |
HORVU6Hr1G063580.1 | Barley | cytosol | 21.28 | 34.19 |
Bra031641.1-P | Field mustard | cytosol | 30.85 | 33.82 |
CDY06330 | Canola | cytosol | 30.85 | 33.82 |
Solyc01g067720.2.1 | Tomato | plastid | 36.7 | 33.33 |
Bra018597.1-P | Field mustard | cytosol | 32.18 | 32.61 |
CDX93534 | Canola | cytosol | 32.18 | 32.61 |
AT1G08820.3 | Thale cress | cytosol | 33.24 | 32.38 |
CDY32136 | Canola | cytosol | 32.71 | 32.37 |
CDY31124 | Canola | cytosol | 32.71 | 32.28 |
CDX95029 | Canola | cytosol | 31.65 | 31.82 |
Bra030744.1-P | Field mustard | cytosol | 32.98 | 31.55 |
HORVU2Hr1G097220.19 | Barley | plastid | 20.48 | 31.17 |
KRG92793 | Soybean | cytosol | 36.44 | 28.48 |
HORVU6Hr1G062050.9 | Barley | mitochondrion | 21.81 | 28.18 |
CDY22664 | Canola | plasma membrane | 30.85 | 27.36 |
KRH34006 | Soybean | cytosol | 36.97 | 26.23 |
HORVU2Hr1G003640.7 | Barley | cytosol | 10.11 | 18.1 |
HORVU3Hr1G006600.1 | Barley | cytosol | 11.44 | 6.05 |
HORVU5Hr1G012420.3 | Barley | nucleus | 10.64 | 4.06 |
HORVU6Hr1G011350.2 | Barley | cytosol | 0.27 | 0.08 |
Protein Annotations
Gene3D:2.60.40.10 | MapMan:20.7.1 | UniProt:A0A287MHF9 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0005886 | GO:GO:0016020 |
GO:GO:0016021 | EnsemblPlantsGene:HORVU3Hr1G099730 | EnsemblPlants:HORVU3Hr1G099730.5 | InterPro:IPR000535 | InterPro:IPR013783 | InterPro:Ig-like_fold |
InterPro:MSP_dom | PFAM:PF00635 | PFscan:PS50202 | PANTHER:PTHR10809 | PANTHER:PTHR10809:SF89 | InterPro:PapD-like_sf |
SUPFAM:SSF49354 | TMHMM:TMhelix | UniParc:UPI000B46E5CB | InterPro:VAP | SEG:seg | : |
Description
No Description!
Coordinates
chrchr3H:-:662367684..662373032
Molecular Weight (calculated)
41896.7 Da
IEP (calculated)
5.809
GRAVY (calculated)
-0.301
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQGVVEIQP RELQFTFELK KQSSCSVHLV NKSDEYVAFK VKTTSPKRYC VRPNIGVILP RATCDFTVTM QAQRTAPPDM QLKDKFLVQT TVVPPGTSDE
101: DLIPAFFSKE TNAYIEESKL RVVLVDASRP PVEQLINNVP STTVAVEVPV LKDTLNVQNE VPAMEKKVPV QNEVPAMEKK VPASQEKISA VPNIPSPVRE
201: SPILQEVPVL LHEEPAILAE SPPPLKDESP PPLKHESPSS IKDSSAITIE KLSPLKEETV TSKVSPLEET IPQETVTVSD RGFFSVQNHQ LSHVTEDVQN
301: LKSKLNNLES KLEGAEKMII KLREESRTMT QERDRLQQEM VVFLKKGTPK SQLGFPLLFV VYVALLGTSL GYLFRL
101: DLIPAFFSKE TNAYIEESKL RVVLVDASRP PVEQLINNVP STTVAVEVPV LKDTLNVQNE VPAMEKKVPV QNEVPAMEKK VPASQEKISA VPNIPSPVRE
201: SPILQEVPVL LHEEPAILAE SPPPLKDESP PPLKHESPSS IKDSSAITIE KLSPLKEETV TSKVSPLEET IPQETVTVSD RGFFSVQNHQ LSHVTEDVQN
301: LKSKLNNLES KLEGAEKMII KLREESRTMT QERDRLQQEM VVFLKKGTPK SQLGFPLLFV VYVALLGTSL GYLFRL
001: MNMPLLDIQP RTLQFAVDLK KQTSCVVQLT NTTHHYVAFK VKTTSPKKYC VRPNVGVVAP KSTCEFTVIM QAFKEPPPDM VCKDKFLIQS TAVSAETTDE
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT
Arabidopsis Description
PVA22VAP27-2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.