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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G511900.2 Wheat cytosol 92.82 96.14
TraesCS3D01G462100.3 Wheat cytosol 92.29 95.59
TraesCS3A01G467600.2 Wheat cytosol 92.29 95.59
EES04183 Sorghum cytosol 67.29 67.11
Os01t0936800-01 Rice cytosol, plasma membrane 65.96 65.26
Zm00001d011904_P001 Maize cytosol 67.82 65.22
Zm00001d042180_P002 Maize cytosol 66.49 62.34
GSMUA_Achr8P21990_001 Banana cytosol 40.69 50.83
GSMUA_Achr3P08840_001 Banana cytosol 30.32 47.5
GSMUA_Achr10P... Banana cytosol 37.77 47.33
VIT_05s0020g01970.t01 Wine grape cytosol 36.17 46.42
KRH50932 Soybean cytosol 36.17 46.1
KRH02189 Soybean cytosol 36.17 46.1
HORVU0Hr1G021390.2 Barley cytosol, golgi, plasma membrane 28.46 44.96
VIT_14s0030g00730.t01 Wine grape cytosol 40.16 44.94
HORVU6Hr1G060760.3 Barley cytosol, golgi, plasma membrane 26.86 44.3
KRH11275 Soybean cytosol 31.12 42.09
HORVU2Hr1G091830.4 Barley cytosol 27.13 40.96
Solyc01g098200.2.1 Tomato cytosol 33.24 39.56
PGSC0003DMT400057834 Potato cytosol 33.24 39.56
PGSC0003DMT400027619 Potato cytosol 36.7 38.87
HORVU7Hr1G071270.2 Barley mitochondrion 27.93 35.59
HORVU6Hr1G063580.1 Barley cytosol 21.28 34.19
Bra031641.1-P Field mustard cytosol 30.85 33.82
CDY06330 Canola cytosol 30.85 33.82
Solyc01g067720.2.1 Tomato plastid 36.7 33.33
Bra018597.1-P Field mustard cytosol 32.18 32.61
CDX93534 Canola cytosol 32.18 32.61
AT1G08820.3 Thale cress cytosol 33.24 32.38
CDY32136 Canola cytosol 32.71 32.37
CDY31124 Canola cytosol 32.71 32.28
CDX95029 Canola cytosol 31.65 31.82
Bra030744.1-P Field mustard cytosol 32.98 31.55
HORVU2Hr1G097220.19 Barley plastid 20.48 31.17
KRG92793 Soybean cytosol 36.44 28.48
HORVU6Hr1G062050.9 Barley mitochondrion 21.81 28.18
CDY22664 Canola plasma membrane 30.85 27.36
KRH34006 Soybean cytosol 36.97 26.23
HORVU2Hr1G003640.7 Barley cytosol 10.11 18.1
HORVU3Hr1G006600.1 Barley cytosol 11.44 6.05
HORVU5Hr1G012420.3 Barley nucleus 10.64 4.06
HORVU6Hr1G011350.2 Barley cytosol 0.27 0.08
Protein Annotations
Gene3D:2.60.40.10MapMan:20.7.1UniProt:A0A287MHF9ncoils:CoilGO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0005886GO:GO:0016020
GO:GO:0016021EnsemblPlantsGene:HORVU3Hr1G099730EnsemblPlants:HORVU3Hr1G099730.5InterPro:IPR000535InterPro:IPR013783InterPro:Ig-like_fold
InterPro:MSP_domPFAM:PF00635PFscan:PS50202PANTHER:PTHR10809PANTHER:PTHR10809:SF89InterPro:PapD-like_sf
SUPFAM:SSF49354TMHMM:TMhelixUniParc:UPI000B46E5CBInterPro:VAPSEG:seg:
Description
No Description!
Coordinates
chrchr3H:-:662367684..662373032
Molecular Weight (calculated)
41896.7 Da
IEP (calculated)
5.809
GRAVY (calculated)
-0.301
Length
376 amino acids
Sequence
(BLAST)
001: MGQGVVEIQP RELQFTFELK KQSSCSVHLV NKSDEYVAFK VKTTSPKRYC VRPNIGVILP RATCDFTVTM QAQRTAPPDM QLKDKFLVQT TVVPPGTSDE
101: DLIPAFFSKE TNAYIEESKL RVVLVDASRP PVEQLINNVP STTVAVEVPV LKDTLNVQNE VPAMEKKVPV QNEVPAMEKK VPASQEKISA VPNIPSPVRE
201: SPILQEVPVL LHEEPAILAE SPPPLKDESP PPLKHESPSS IKDSSAITIE KLSPLKEETV TSKVSPLEET IPQETVTVSD RGFFSVQNHQ LSHVTEDVQN
301: LKSKLNNLES KLEGAEKMII KLREESRTMT QERDRLQQEM VVFLKKGTPK SQLGFPLLFV VYVALLGTSL GYLFRL
Best Arabidopsis Sequence Match ( AT1G08820.2 )
(BLAST)
001: MNMPLLDIQP RTLQFAVDLK KQTSCVVQLT NTTHHYVAFK VKTTSPKKYC VRPNVGVVAP KSTCEFTVIM QAFKEPPPDM VCKDKFLIQS TAVSAETTDE
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT
Arabidopsis Description
PVA22VAP27-2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.