Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G511900.2 | Wheat | cytosol | 98.07 | 98.07 |
| TraesCS3A01G467600.2 | Wheat | cytosol | 97.52 | 97.52 |
| HORVU3Hr1G099730.5 | Barley | cytosol | 95.59 | 92.29 |
| EES04183 | Sorghum | cytosol | 70.52 | 67.9 |
| Os01t0936800-01 | Rice | cytosol, plasma membrane | 69.42 | 66.32 |
| Zm00001d011904_P001 | Maize | cytosol | 71.07 | 65.98 |
| Zm00001d042180_P002 | Maize | cytosol | 69.7 | 63.09 |
| GSMUA_Achr8P21990_001 | Banana | cytosol | 42.15 | 50.83 |
| GSMUA_Achr10P... | Banana | cytosol | 39.12 | 47.33 |
| KRH50932 | Soybean | cytosol | 38.29 | 47.12 |
| GSMUA_Achr3P08840_001 | Banana | cytosol | 31.13 | 47.08 |
| KRH02189 | Soybean | cytosol | 38.02 | 46.78 |
| VIT_05s0020g01970.t01 | Wine grape | cytosol | 37.47 | 46.42 |
| TraesCS7D01G296900.1 | Wheat | cytosol, golgi, plasma membrane | 30.03 | 45.8 |
| VIT_14s0030g00730.t01 | Wine grape | cytosol | 42.15 | 45.54 |
| TraesCS6D01G220300.1 | Wheat | cytosol | 27.55 | 43.86 |
| KRH11275 | Soybean | cytosol | 32.78 | 42.81 |
| TraesCS7D01G296400.1 | Wheat | cytosol | 28.1 | 41.98 |
| TraesCS2D01G365300.2 | Wheat | cytosol | 27.55 | 40.16 |
| PGSC0003DMT400057834 | Potato | cytosol | 34.71 | 39.87 |
| Solyc01g098200.2.1 | Tomato | cytosol | 34.71 | 39.87 |
| PGSC0003DMT400027619 | Potato | cytosol | 38.29 | 39.15 |
| TraesCS1D01G163100.1 | Wheat | cytosol | 28.1 | 37.23 |
| TraesCS2D01G409200.1 | Wheat | cytosol, plastid | 23.97 | 35.95 |
| TraesCS6D01G224100.1 | Wheat | cytosol, golgi, plasma membrane | 22.86 | 35.78 |
| CDY06330 | Canola | cytosol | 32.23 | 34.11 |
| Bra031641.1-P | Field mustard | cytosol | 32.23 | 34.11 |
| Solyc01g067720.2.1 | Tomato | plastid | 38.29 | 33.57 |
| CDX93534 | Canola | cytosol | 33.61 | 32.88 |
| Bra018597.1-P | Field mustard | cytosol | 33.33 | 32.61 |
| TraesCS6D01G229800.1 | Wheat | cytosol | 20.94 | 32.48 |
| AT1G08820.3 | Thale cress | cytosol | 34.44 | 32.38 |
| CDY32136 | Canola | cytosol | 33.88 | 32.37 |
| CDY31124 | Canola | cytosol | 33.88 | 32.28 |
| CDX95029 | Canola | cytosol | 33.06 | 32.09 |
| Bra030744.1-P | Field mustard | cytosol | 33.88 | 31.3 |
| KRG92793 | Soybean | cytosol | 37.74 | 28.48 |
| CDY22664 | Canola | plasma membrane | 32.23 | 27.59 |
| KRH34006 | Soybean | cytosol | 38.29 | 26.23 |
| TraesCS7D01G526500.1 | Wheat | cytosol | 11.57 | 8.64 |
| TraesCS3D01G522300.1 | Wheat | cytosol | 10.74 | 8.5 |
| TraesCS7D01G013200.1 | Wheat | cytosol | 19.28 | 4.89 |
| TraesCS4D01G348900.1 | Wheat | cytosol, nucleus, plastid | 11.29 | 4.15 |
| TraesCS7D01G002600.1 | Wheat | cytosol | 14.88 | 3.71 |
| TraesCS7D01G526400.1 | Wheat | cytosol | 2.2 | 2.14 |
| TraesCS7D01G006600.1 | Wheat | cytosol | 0.28 | 0.41 |
| TraesCS3D01G542400.1 | Wheat | cytosol | 0.28 | 0.39 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:20.7.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0005886 | GO:GO:0016020 | InterPro:IPR000535 |
| InterPro:IPR013783 | InterPro:Ig-like_fold | InterPro:MSP_dom | PFAM:PF00635 | PIRSF:PIRSF019693 | PFscan:PS50202 |
| PANTHER:PTHR10809 | PANTHER:PTHR10809:SF45 | InterPro:PapD-like_sf | SUPFAM:SSF49354 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3D01G462100 |
| EnsemblPlants:TraesCS3D01G462100.3 | InterPro:VAP | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3D:+:566481511..566486241
Molecular Weight (calculated)
40279.6 Da
IEP (calculated)
5.541
GRAVY (calculated)
-0.317
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQGVVEIQP RELQFTFELK KQSSCSVHLV NKSDEYVAFK VKTTSPKRYC VRPNIGVILP RATCDFTVTM QAQRTAPPDM QLKDKFLVQT TVVPPGTSDD
101: DLIPAFFSKE TNAYIEESKL RVVLVDASRP PVEQLINNVP STDAAVEVPV LKDTPNVQNE VPAMEKKVPA PQEKISAVVP NIPSPVRESP ILQEVPVLLH
201: EEPAILAESP PPLKDESPPS LKHESPPPIK DSSAITIEQL SPLKEETVTS KVSPLEETLP KETVAVSDRG FFSVQNHQLS HVTEDVQNLK SKLNNLESKL
301: EGAEKMIIKL REESRTTTQE RDRLQQEMVV LKKGTPKSQL GFPLLFVVYV ALLGTSLGYL LRL
101: DLIPAFFSKE TNAYIEESKL RVVLVDASRP PVEQLINNVP STDAAVEVPV LKDTPNVQNE VPAMEKKVPA PQEKISAVVP NIPSPVRESP ILQEVPVLLH
201: EEPAILAESP PPLKDESPPS LKHESPPPIK DSSAITIEQL SPLKEETVTS KVSPLEETLP KETVAVSDRG FFSVQNHQLS HVTEDVQNLK SKLNNLESKL
301: EGAEKMIIKL REESRTTTQE RDRLQQEMVV LKKGTPKSQL GFPLLFVVYV ALLGTSLGYL LRL
001: MNMPLLDIQP RTLQFAVDLK KQTSCVVQLT NTTHHYVAFK VKTTSPKKYC VRPNVGVVAP KSTCEFTVIM QAFKEPPPDM VCKDKFLIQS TAVSAETTDE
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT
Arabidopsis Description
PVA22VAP27-2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.