CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011904_P001	Maize	cytosol	90.72	87.47
Zm00001d042180_P002	Maize	cytosol	90.19	84.79
TraesCS3D01G462100.3	Wheat	cytosol	67.9	70.52
TraesCS3B01G511900.2	Wheat	cytosol	67.9	70.52
TraesCS3A01G467600.2	Wheat	cytosol	67.37	69.97
Os01t0936800-01	Rice	cytosol, plasma membrane	68.7	68.16
HORVU3Hr1G099730.5	Barley	cytosol	67.11	67.29
GSMUA_Achr8P21990_001	Banana	cytosol	41.64	52.16
GSMUA_Achr10P...	Banana	cytosol	39.26	49.33
GSMUA_Achr3P08840_001	Banana	cytosol	31.03	48.75
VIT_05s0020g01970.t01	Wine grape	cytosol	36.6	47.1
VIT_14s0030g00730.t01	Wine grape	cytosol	40.32	45.24
KRH50932	Soybean	cytosol	34.75	44.41
KRH02189	Soybean	cytosol	34.48	44.07
KRH11275	Soybean	cytosol	32.36	43.88
Solyc01g098200.2.1	Tomato	cytosol	36.34	43.35
PGSC0003DMT400057834	Potato	cytosol	36.34	43.35
KXG24454	Sorghum	cytosol	27.59	43.15
EES14570	Sorghum	cytosol, nucleus, plasma membrane	27.32	42.21
KXG21863	Sorghum	cytosol	39.26	40.88
PGSC0003DMT400027619	Potato	cytosol	37.93	40.28
EES12559	Sorghum	cytosol	26.26	39.76
KXG31128	Sorghum	cytosol	23.61	39.56
KXG26858	Sorghum	cytosol, plastid	23.08	35.66
Solyc01g067720.2.1	Tomato	plastid	38.2	34.78
Bra031641.1-P	Field mustard	cytosol	31.57	34.69
CDY06330	Canola	cytosol	31.57	34.69
CDX93534	Canola	cytosol	33.16	33.69
Bra018597.1-P	Field mustard	cytosol	32.89	33.42
CDY32136	Canola	cytosol	33.42	33.16
CDX95029	Canola	cytosol	32.89	33.16
CDY31124	Canola	cytosol	33.42	33.07
Bra030744.1-P	Field mustard	cytosol	33.69	32.32
AT1G08820.3	Thale cress	cytosol	32.89	32.12
EER91402	Sorghum	cytosol	22.81	31.62
EES07504	Sorghum	plastid	22.28	31.58
CDY22664	Canola	plasma membrane	31.57	28.07
KRG92793	Soybean	cytosol	35.54	27.86
EES05798	Sorghum	plastid	22.28	25.93
KRH34006	Soybean	cytosol	36.07	25.66
OQU79125	Sorghum	cytosol	11.14	21.88

Protein Annotations

Gene3D:2.60.40.10	MapMan:20.7.1	EntrezGene:8062286	UniProt:C5XHP5	ncoils:Coil	EnsemblPlants:EES04183
ProteinID:EES04183	ProteinID:EES04183.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000535	InterPro:IPR013783
InterPro:Ig-like_fold	InterPro:MSP_dom	PFAM:PF00635	PFscan:PS50202	PANTHER:PTHR10809	PANTHER:PTHR10809:SF45
InterPro:PapD-like_sf	EnsemblPlantsGene:SORBI_3003G419100	SUPFAM:SSF49354	unigene:Sbi.8911	TMHMM:TMhelix	UniParc:UPI0001A856AE
InterPro:VAP	RefSeq:XP_002459063.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:72443981..72451038

Molecular Weight (calculated)

41896.6 Da

IEP (calculated)

5.534

GRAVY (calculated)

-0.273

Length

377 amino acids

Sequence
(BLAST)

001: MGQDLVEIQP RELQFTFEVK KQSSCVVHLI NKSNEYVAFK VKTTSPKRYC VRPNTGVILP RKTCEFIVTM QALRAAPPDM QLKDKFLVQT TVVPYGTSDE
101: ELVPAFFSKE TGRYIEESKL RVVLVSAYQS LEEQPTNGIH DTEPAVGIPV QKEMPNIENQ VPDVSIEVPA PLAQAPAIVT GIPSPVEETP GLREIPVPLN
201: EAPAVLAESP SAQKDPSAIT VEHASTVTIE HAPAISIESP PSKQSVPVFK ESPPLKQSVA VFKESPPLEE TTPKEAVMLS DRGLFNVQNH QLSHVTEDVQ
301: NMKSKLNNLE LKLEEAEKMI IRLREESRST TQERDKLQQE MVFLRKKGTP RSQVGFPLLF VVYVALLGTS LGYLLRI

Best Arabidopsis Sequence Match ( AT1G08820.2 )
(BLAST)

001: MNMPLLDIQP RTLQFAVDLK KQTSCVVQLT NTTHHYVAFK VKTTSPKKYC VRPNVGVVAP KSTCEFTVIM QAFKEPPPDM VCKDKFLIQS TAVSAETTDE
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT

Arabidopsis Description

PVA22VAP27-2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.