Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031641.1-P | Field mustard | cytosol | 99.13 | 99.13 |
| CDY22664 | Canola | plasma membrane | 96.5 | 78.07 |
| CDX93534 | Canola | cytosol | 77.84 | 71.97 |
| CDX95029 | Canola | cytosol | 78.13 | 71.66 |
| CDY32136 | Canola | cytosol | 79.3 | 71.58 |
| CDY31124 | Canola | cytosol | 78.72 | 70.87 |
| AT1G08820.3 | Thale cress | cytosol | 76.97 | 68.39 |
| VIT_14s0030g00730.t01 | Wine grape | cytosol | 42.27 | 43.15 |
| CDX91914 | Canola | cytosol | 29.45 | 42.8 |
| CDX74330 | Canola | cytosol | 29.45 | 42.8 |
| CDX71796 | Canola | cytosol | 29.45 | 42.44 |
| CDY41153 | Canola | cytosol | 29.45 | 42.44 |
| CDX89063 | Canola | cytosol, golgi, plasma membrane | 29.45 | 42.26 |
| CDY48365 | Canola | cytosol | 29.45 | 42.26 |
| CDY37029 | Canola | cytosol, golgi, plasma membrane | 29.45 | 42.26 |
| CDX95631 | Canola | cytosol, golgi, plasma membrane | 29.45 | 41.91 |
| CDY27392 | Canola | cytosol, golgi, plasma membrane | 29.15 | 41.84 |
| CDX67837 | Canola | cytosol, golgi, plasma membrane | 29.15 | 41.67 |
| CDY56247 | Canola | cytosol | 29.15 | 41.67 |
| CDX83400 | Canola | cytosol, nucleus, plasma membrane | 29.15 | 41.49 |
| CDY57247 | Canola | cytosol | 28.57 | 40.83 |
| GSMUA_Achr8P21990_001 | Banana | cytosol | 34.99 | 39.87 |
| PGSC0003DMT400057834 | Potato | cytosol | 36.44 | 39.56 |
| Solyc01g098200.2.1 | Tomato | cytosol | 35.86 | 38.92 |
| GSMUA_Achr10P... | Banana | cytosol | 33.53 | 38.33 |
| CDY40565 | Canola | cytosol | 23.91 | 37.61 |
| CDY28969 | Canola | cytosol | 23.91 | 37.61 |
| CDY25982 | Canola | cytosol | 23.62 | 36.82 |
| CDX77746 | Canola | cytosol | 23.32 | 36.7 |
| CDY33519 | Canola | cytosol | 23.32 | 36.7 |
| CDY43438 | Canola | cytosol | 23.32 | 36.36 |
| GSMUA_Achr3P08840_001 | Banana | cytosol | 25.36 | 36.25 |
| CDY44556 | Canola | cytosol, extracellular, plastid | 9.91 | 33.33 |
| TraesCS3A01G467600.2 | Wheat | cytosol | 34.11 | 32.23 |
| TraesCS3D01G462100.3 | Wheat | cytosol | 34.11 | 32.23 |
| TraesCS3B01G511900.2 | Wheat | cytosol | 33.82 | 31.96 |
| Os01t0936800-01 | Rice | cytosol, plasma membrane | 35.28 | 31.84 |
| KXG21863 | Sorghum | cytosol | 33.53 | 31.77 |
| EES04183 | Sorghum | cytosol | 34.69 | 31.57 |
| Zm00001d042180_P002 | Maize | cytosol | 36.44 | 31.17 |
| Zm00001d010495_P002 | Maize | cytosol | 34.4 | 31.05 |
| Zm00001d011904_P001 | Maize | cytosol | 35.28 | 30.95 |
| HORVU3Hr1G099730.5 | Barley | cytosol | 33.82 | 30.85 |
| KRG92793 | Soybean | cytosol | 41.98 | 29.94 |
| KRH34006 | Soybean | cytosol | 42.86 | 27.74 |
| Os05t0373000-01 | Rice | cytosol | 33.53 | 24.11 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:20.7.1 | GO:A0A078EW98 | EnsemblPlants:CDY06330 | ProteinID:CDY06330 | ProteinID:CDY06330.1 |
| ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005789 | GO:GO:0016020 | EnsemblPlantsGene:GSBRNA2T00122260001 | InterPro:IPR000535 | InterPro:IPR013783 | InterPro:Ig-like_fold |
| InterPro:MSP_dom | PFAM:PF00635 | PIRSF:PIRSF019693 | PFscan:PS50202 | PANTHER:PTHR10809 | PANTHER:PTHR10809:SF45 |
| InterPro:PapD-like_sf | SUPFAM:SSF49354 | TMHMM:TMhelix | UniParc:UPI0004EE7478 | InterPro:VAP | : |
Description
BnaA09g48730D
Coordinates
chrLK031968:-:834318..837724
Molecular Weight (calculated)
38405.5 Da
IEP (calculated)
6.527
GRAVY (calculated)
-0.423
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMPLLDIQP RTLKFPVDLK KQTTCMVLLT NTTDRFVAFK VKTTSPKKYC VRPNVGVVAP NSSCEFSVIM QAFKEPPLDL ACKDKFLIQS TAVPADTTDE
101: DITASMFSKG EGKHIEENKL RVTLVMPSDS PELSPVKGPT KEEAVFEDSI LKDRSYGQSE ILPPPQYESE IVKEPRMVGH DELKASYGAK ELVQPKKGVM
201: GFMEDLNPAN DLKPTHNLDT PTAMDFPGDK GFTNGMTYPE VVQLEKRDGQ KINASDEHKL VKDIEEMKVK VKALESKLQQ ADSTISKLME ERSIGSQHRE
301: SLQQELTDLR TKKIVKEKHI GFPLLFVCVV AFINIVIGYG LRT
101: DITASMFSKG EGKHIEENKL RVTLVMPSDS PELSPVKGPT KEEAVFEDSI LKDRSYGQSE ILPPPQYESE IVKEPRMVGH DELKASYGAK ELVQPKKGVM
201: GFMEDLNPAN DLKPTHNLDT PTAMDFPGDK GFTNGMTYPE VVQLEKRDGQ KINASDEHKL VKDIEEMKVK VKALESKLQQ ADSTISKLME ERSIGSQHRE
301: SLQQELTDLR TKKIVKEKHI GFPLLFVCVV AFINIVIGYG LRT
001: MNMPLLDIQP RTLQFAVDLK KQTSCVVQLT NTTHHYVAFK VKTTSPKKYC VRPNVGVVAP KSTCEFTVIM QAFKEPPPDM VCKDKFLIQS TAVSAETTDE
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT
Arabidopsis Description
PVA22VAP27-2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.