CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92793	Soybean	cytosol	82.26	90.64
KRH50932	Soybean	cytosol	28.87	51.86
KRH02189	Soybean	cytosol	28.87	51.86
VIT_14s0030g00730.t01	Wine grape	cytosol	31.51	49.7
KRH28066	Soybean	cytosol	16.23	48.04
GSMUA_Achr8P21990_001	Banana	cytosol	25.28	44.52
Solyc01g098200.2.1	Tomato	cytosol	26.23	43.99
KRH11275	Soybean	cytosol	23.02	43.88
PGSC0003DMT400057834	Potato	cytosol	26.04	43.67
AT1G08820.3	Thale cress	cytosol	31.7	43.52
KRH76164	Soybean	endoplasmic reticulum	19.62	43.15
KRH65384	Soybean	cytosol	19.62	43.15
CDX93534	Canola	cytosol	30.19	43.13
Bra018597.1-P	Field mustard	cytosol	30.0	42.86
Bra031641.1-P	Field mustard	cytosol	27.74	42.86
CDY06330	Canola	cytosol	27.74	42.86
CDX95029	Canola	cytosol	30.19	42.78
KRH04117	Soybean	cytosol, nucleus, plasma membrane	19.43	42.74
KRH57391	Soybean	endoplasmic reticulum, mitochondrion	19.43	42.74
CDY31124	Canola	cytosol	30.57	42.52
GSMUA_Achr3P08840_001	Banana	cytosol	19.06	42.08
CDY32136	Canola	cytosol	30.0	41.84
KRH77373	Soybean	endoplasmic reticulum	18.87	41.49
Bra030744.1-P	Field mustard	cytosol	30.75	41.48
KRH04206	Soybean	cytosol	16.79	40.09
GSMUA_Achr10P...	Banana	cytosol	22.64	40.0
KRH57501	Soybean	plasma membrane	15.66	39.34
KRH28185	Soybean	cytosol, golgi, nucleus	16.23	39.27
TraesCS3D01G462100.3	Wheat	cytosol	26.23	38.29
TraesCS3B01G511900.2	Wheat	cytosol	26.04	38.02
TraesCS3A01G467600.2	Wheat	cytosol	25.85	37.74
HORVU3Hr1G099730.5	Barley	cytosol	26.23	36.97
EES04183	Sorghum	cytosol	25.66	36.07
Zm00001d011904_P001	Maize	cytosol	26.04	35.29
Os01t0936800-01	Rice	cytosol, plasma membrane	25.28	35.26
CDY22664	Canola	plasma membrane	28.11	35.14
Zm00001d042180_P002	Maize	cytosol	26.23	34.66
KRH77304	Soybean	plasma membrane, vacuole	16.04	34.14
KXG21863	Sorghum	cytosol	20.75	30.39
Zm00001d010495_P002	Maize	cytosol	20.75	28.95
Os05t0373000-01	Rice	cytosol	22.08	24.53

Protein Annotations

EntrezGene:100783454	Gene3D:2.60.40.10	MapMan:20.7.1	UniProt:A0A0R0HUB4	EMBL:ACUP02006567	ncoils:Coil
EnsemblPlantsGene:GLYMA_10G158400	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005789	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000535	InterPro:IPR013783	InterPro:Ig-like_fold
EnsemblPlants:KRH34006	ProteinID:KRH34006	ProteinID:KRH34006.1	InterPro:MSP_dom	PFAM:PF00635	PFscan:PS50202
PANTHER:PTHR10809	PANTHER:PTHR10809:SF45	InterPro:PapD-like_sf	SUPFAM:SSF49354	TMHMM:TMhelix	UniParc:UPI0003DEA4C8
InterPro:VAP	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:39233639..39238720

Molecular Weight (calculated)

60473.2 Da

IEP (calculated)

5.060

GRAVY (calculated)

-0.604

Length

530 amino acids

Sequence
(BLAST)

001: MSEAPLLQIE PKELEFIFEL KKQSSCSVQL TNNTDHYVAF KVKTTSPKKY SVRPNVGVLA PKATCEFIVT MQAQREAPED MVCKDKFLIQ STKVHAETTS
101: EDVTSSLFVK DGSKYIEENK LKVTLISPPN SPDLSPINGD FKNGLDHEKV QIYSKDEIQS PEPMIRGHFT NVLKNPDMVH EVLELEEDME LRQEYYMGHT
201: MKHVGDPKEE AGLKVSKNEL NMLKDVEELK PQKKLEVEVS EDLDLNKVKN AEEWKPEKAA ELKVSKVLDL NKVKNAEELK PEKAAELKVS KVLDLNKVKN
301: AEELKPEKAA ELKVSKVLDL NKVKNIEEQK PEKAADLNMS KVLDLNPVDD VKELKPETET VLKMSKDLEL KIVKSVEELK PEKETELKIS KDMELETVKN
401: VEELKPENET ELKMSKDWEW RTVKNVEELK PEKEAELIVS KSIEEVKLLK AIEEMKLKLD GLESKLNESG VTISKLTEER MLSNQETKIL QEKLADLINK
501: GPRKVQVGFP LLYVCMVALI CVFLGYRLHS

Best Arabidopsis Sequence Match ( AT1G08820.2 )
(BLAST)

001: MNMPLLDIQP RTLQFAVDLK KQTSCVVQLT NTTHHYVAFK VKTTSPKKYC VRPNVGVVAP KSTCEFTVIM QAFKEPPPDM VCKDKFLIQS TAVSAETTDE
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT

Arabidopsis Description

PVA22VAP27-2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.