Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH04206 | Soybean | cytosol | 91.0 | 86.49 |
| KRH28185 | Soybean | cytosol, golgi, nucleus | 76.3 | 73.52 |
| KRH77304 | Soybean | plasma membrane, vacuole | 75.83 | 64.26 |
| PGSC0003DMT400067515 | Potato | nucleus | 66.35 | 63.64 |
| Solyc08g078000.2.1 | Tomato | nucleus | 65.88 | 63.18 |
| CDY28969 | Canola | cytosol | 63.51 | 61.47 |
| CDY40565 | Canola | cytosol | 63.51 | 61.47 |
| Bra022110.1-P | Field mustard | cytosol | 63.03 | 61.01 |
| Solyc08g007200.2.1 | Tomato | unclear | 61.61 | 60.47 |
| PGSC0003DMT400052797 | Potato | cytosol | 61.61 | 60.47 |
| AT5G47180.1 | Thale cress | cytosol | 63.03 | 60.45 |
| CDX77746 | Canola | cytosol | 61.61 | 59.63 |
| CDY33519 | Canola | cytosol | 61.61 | 59.63 |
| Bra024958.1-P | Field mustard | cytosol | 60.19 | 58.26 |
| CDY43438 | Canola | cytosol | 60.66 | 58.18 |
| Bra017499.1-P | Field mustard | cytosol | 60.19 | 57.73 |
| Bra022111.1-P | Field mustard | cytosol | 60.19 | 57.73 |
| CDY25982 | Canola | cytosol | 60.19 | 57.73 |
| GSMUA_Achr11P... | Banana | cytosol | 59.24 | 54.35 |
| TraesCS6D01G224100.1 | Wheat | cytosol, golgi, plasma membrane | 57.82 | 52.59 |
| TraesCS6B01G282300.1 | Wheat | cytosol, golgi, plasma membrane | 57.82 | 52.59 |
| TraesCS6A01G242200.1 | Wheat | cytosol, golgi, plasma membrane | 57.82 | 52.59 |
| GSMUA_Achr5P18320_001 | Banana | cytosol, nucleus, plasma membrane | 56.4 | 51.07 |
| Os10t0549100-01 | Rice | plasma membrane | 54.03 | 48.93 |
| Os02t0652550-00 | Rice | cytosol | 55.45 | 43.82 |
| HORVU6Hr1G062050.9 | Barley | mitochondrion | 59.24 | 42.96 |
| Zm00001d051329_P002 | Maize | mitochondrion, plasma membrane, plastid | 58.29 | 40.73 |
| KRH76164 | Soybean | endoplasmic reticulum | 46.45 | 40.66 |
| KRH65384 | Soybean | cytosol | 46.45 | 40.66 |
| Zm00001d017448_P001 | Maize | endoplasmic reticulum, golgi, plastid | 57.35 | 39.03 |
| KRH28066 | Soybean | cytosol | 32.7 | 38.55 |
| KRH77373 | Soybean | endoplasmic reticulum | 43.13 | 37.76 |
| EES05798 | Sorghum | plastid | 57.82 | 37.65 |
| Zm00001d014260_P001 | Maize | plastid | 31.75 | 37.64 |
| KRH04117 | Soybean | cytosol, nucleus, plasma membrane | 42.65 | 37.34 |
| KRH57391 | Soybean | endoplasmic reticulum, mitochondrion | 42.18 | 36.93 |
| KRH50932 | Soybean | cytosol | 41.23 | 29.49 |
| KRH02189 | Soybean | cytosol | 41.23 | 29.49 |
| KRH11275 | Soybean | cytosol | 36.49 | 27.7 |
| VIT_00s0287g00080.t01 | Wine grape | extracellular | 45.02 | 27.3 |
| TraesCS2B01G214400.1 | Wheat | mitochondrion | 32.23 | 25.37 |
| KRG92793 | Soybean | cytosol | 38.39 | 16.84 |
| KRH34006 | Soybean | cytosol | 39.34 | 15.66 |
Protein Annotations
| EntrezGene:100792882 | Gene3D:2.60.40.10 | MapMan:20.7.1 | EMBL:ACUP02002849 | ncoils:Coil | EnsemblPlantsGene:GLYMA_05G064600 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR000535 | InterPro:IPR013783 | InterPro:Ig-like_fold | UniProt:K7KN79 |
| EnsemblPlants:KRH57501 | ProteinID:KRH57501 | ProteinID:KRH57501.1 | InterPro:MSP_dom | PFAM:PF00635 | PIRSF:PIRSF019693 |
| PFscan:PS50202 | PANTHER:PTHR10809 | PANTHER:PTHR10809:SF91 | InterPro:PapD-like_sf | SUPFAM:SSF49354 | TMHMM:TMhelix |
| UniParc:UPI000296D647 | InterPro:VAP | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:6322348..6336462
Molecular Weight (calculated)
23959.8 Da
IEP (calculated)
7.910
GRAVY (calculated)
-0.527
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MLIMFMSTVE LEKQTYCDLK VLNNTGNYVA FKVKTTSPKK YFVRPNTGVV HPWDSCIIRV TLQAQQEYPP DMQCKDKFLL QSTIVNPNTD VDDLPPDTFN
101: KDGEKSIEDM KLRVVYISPT SPQGSTEGDT VKNSTQKPDT NSSETVQRLK EERDANVLQT RQLQQELDML KRRRNRRGDP GFSFTFAMFV GLIGLLCGLL
201: LKLSLSSPPT E
101: KDGEKSIEDM KLRVVYISPT SPQGSTEGDT VKNSTQKPDT NSSETVQRLK EERDANVLQT RQLQQELDML KRRRNRRGDP GFSFTFAMFV GLIGLLCGLL
201: LKLSLSSPPT E
001: MSNELLTIDP VDLQFPFELK KQISCSLYLG NKTDNYVAFK VKTTNPKKYC VRPNTGVVHP RSSSEVLVTM QAQKEAPADL QCKDKFLLQC VVASPGATPK
101: DVTHEMFSKE AGHRVEETKL RVVYVAPPRP PSPVREGSEE GSSPRASVSD NGNASDFTAA PRFSADRVDA QDNSSEARAL VTKLTEEKNS AVQLNNRLQQ
201: ELDQLRRESK RSKSGGIPFM YVLLVGLIGL ILGYIMKRT
101: DVTHEMFSKE AGHRVEETKL RVVYVAPPRP PSPVREGSEE GSSPRASVSD NGNASDFTAA PRFSADRVDA QDNSSEARAL VTKLTEEKNS AVQLNNRLQQ
201: ELDQLRRESK RSKSGGIPFM YVLLVGLIGL ILGYIMKRT
Arabidopsis Description
PVA12Vesicle-associated protein 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHC8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.