Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH02189 | Soybean | cytosol | 93.56 | 93.56 |
| KRH11275 | Soybean | cytosol | 61.69 | 65.47 |
| VIT_05s0020g01970.t01 | Wine grape | cytosol | 57.63 | 58.02 |
| KRH28066 | Soybean | cytosol | 31.86 | 52.51 |
| KRH57391 | Soybean | endoplasmic reticulum, mitochondrion | 39.66 | 48.55 |
| KRH04117 | Soybean | cytosol, nucleus, plasma membrane | 38.98 | 47.72 |
| KRH76164 | Soybean | endoplasmic reticulum | 37.97 | 46.47 |
| KRH65384 | Soybean | cytosol | 37.97 | 46.47 |
| KRH77373 | Soybean | endoplasmic reticulum | 37.63 | 46.06 |
| GSMUA_Achr8P21990_001 | Banana | cytosol | 44.41 | 43.52 |
| GSMUA_Achr10P... | Banana | cytosol | 43.73 | 43.0 |
| PGSC0003DMT400027619 | Potato | cytosol | 51.53 | 42.82 |
| KRH04206 | Soybean | cytosol | 31.53 | 41.89 |
| KRH57501 | Soybean | plasma membrane | 29.49 | 41.23 |
| GSMUA_Achr3P08840_001 | Banana | cytosol | 33.22 | 40.83 |
| KRH28185 | Soybean | cytosol, golgi, nucleus | 29.83 | 40.18 |
| TraesCS3D01G462100.3 | Wheat | cytosol | 47.12 | 38.29 |
| TraesCS3A01G467600.2 | Wheat | cytosol | 46.78 | 38.02 |
| TraesCS3B01G511900.2 | Wheat | cytosol | 46.1 | 37.47 |
| HORVU3Hr1G099730.5 | Barley | cytosol | 46.1 | 36.17 |
| KRH77304 | Soybean | plasma membrane, vacuole | 30.51 | 36.14 |
| Solyc01g067720.2.1 | Tomato | plastid | 50.17 | 35.75 |
| EES04183 | Sorghum | cytosol | 44.41 | 34.75 |
| Os01t0936800-01 | Rice | cytosol, plasma membrane | 44.75 | 34.74 |
| Zm00001d011904_P001 | Maize | cytosol | 44.07 | 33.25 |
| Zm00001d042180_P002 | Maize | cytosol | 44.07 | 32.42 |
| KXG21863 | Sorghum | cytosol | 39.32 | 32.04 |
| Zm00001d010495_P002 | Maize | cytosol | 40.0 | 31.05 |
| KRG92793 | Soybean | cytosol | 50.17 | 30.77 |
| KRH34006 | Soybean | cytosol | 51.86 | 28.87 |
| Os05t0373000-01 | Rice | cytosol | 41.36 | 25.58 |
Protein Annotations
| EntrezGene:100794670 | Gene3D:2.60.40.10 | MapMan:20.7.1 | EMBL:ACUP02004720 | EMBL:BT093291 | UniProt:C6T767 |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_07G252000 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR000535 | InterPro:IPR013783 |
| InterPro:Ig-like_fold | EnsemblPlants:KRH50932 | ProteinID:KRH50932 | ProteinID:KRH50932.1 | ProteinID:KRH50933.1 | InterPro:MSP_dom |
| PFAM:PF00635 | PIRSF:PIRSF019693 | PFscan:PS50202 | PANTHER:PTHR10809 | PANTHER:PTHR10809:SF66 | InterPro:PapD-like_sf |
| SUPFAM:SSF49354 | TMHMM:TMhelix | UniParc:UPI0001B1642E | InterPro:VAP | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr7:-:42948768..42952037
Molecular Weight (calculated)
33303.3 Da
IEP (calculated)
5.525
GRAVY (calculated)
-0.448
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MATELLQIEP AELRFVFELK KQSSCLVQLA NTTDHFIAFK VKTTSPKKYC VRPNIGIVKP NDKCDFTVTM QAQRMAPPDM LCKDKFLIQS TVVPFGTTED
101: DITSDMFSKD SGKYIEEKKL RVVLISPPSS PVLLPVNGDM KHDPSNEIYV QKDRVPSGVE NIPPPCKVSD EVKGLEPAQD MKEDREDEDI VPRQAENVGD
201: MKPAKDDMQL NLTNESEELK SKLSVMDSKL RVAEVTITKL NEERHRNTQE KDLLKKELEV LKRQINTKGS QAGFPFLFVC MVALISVAVG YYIHP
101: DITSDMFSKD SGKYIEEKKL RVVLISPPSS PVLLPVNGDM KHDPSNEIYV QKDRVPSGVE NIPPPCKVSD EVKGLEPAQD MKEDREDEDI VPRQAENVGD
201: MKPAKDDMQL NLTNESEELK SKLSVMDSKL RVAEVTITKL NEERHRNTQE KDLLKKELEV LKRQINTKGS QAGFPFLFVC MVALISVAVG YYIHP
001: MNMPLLDIQP RTLQFAVDLK KQTSCVVQLT NTTHHYVAFK VKTTSPKKYC VRPNVGVVAP KSTCEFTVIM QAFKEPPPDM VCKDKFLIQS TAVSAETTDE
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT
Arabidopsis Description
PVA22VAP27-2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.