Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH57391 | Soybean | endoplasmic reticulum, mitochondrion | 98.34 | 98.34 |
| KRH28066 | Soybean | cytosol | 61.83 | 83.24 |
| KRH77373 | Soybean | endoplasmic reticulum | 82.16 | 82.16 |
| VIT_02s0154g00500.t01 | Wine grape | cytosol, nucleus, plasma membrane | 71.37 | 72.27 |
| KRH65384 | Soybean | cytosol | 72.2 | 72.2 |
| KRH76164 | Soybean | endoplasmic reticulum | 71.37 | 71.37 |
| PGSC0003DMT400032484 | Potato | cytosol, nucleus, plasma membrane | 62.24 | 70.75 |
| Solyc08g078690.2.1 | Tomato | cytosol | 63.9 | 69.37 |
| VIT_13s0106g00400.t01 | Wine grape | cytosol | 39.0 | 69.12 |
| KRH28185 | Soybean | cytosol, golgi, nucleus | 41.08 | 45.21 |
| KRH04206 | Soybean | cytosol | 40.25 | 43.69 |
| KRH57501 | Soybean | plasma membrane | 37.34 | 42.65 |
| KRH77304 | Soybean | plasma membrane, vacuole | 41.08 | 39.76 |
| KRH50932 | Soybean | cytosol | 47.72 | 38.98 |
| KRH02189 | Soybean | cytosol | 47.3 | 38.64 |
| KRH11275 | Soybean | cytosol | 41.49 | 35.97 |
| KRG92793 | Soybean | cytosol | 41.49 | 20.79 |
| KRH34006 | Soybean | cytosol | 42.74 | 19.43 |
Protein Annotations
| EntrezGene:100805159 | Gene3D:2.60.40.10 | MapMan:20.7.1 | EMBL:ACUP02010382 | ncoils:Coil | EnsemblPlantsGene:GLYMA_17G141100 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0016020 | GO:GO:0016021 | UniProt:I1MV04 | InterPro:IPR000535 | InterPro:IPR013783 | InterPro:Ig-like_fold |
| EnsemblPlants:KRH04117 | ProteinID:KRH04117 | ProteinID:KRH04117.1 | InterPro:MSP_dom | PFAM:PF00635 | PIRSF:PIRSF019693 |
| PFscan:PS50202 | PANTHER:PTHR10809 | PANTHER:PTHR10809:SF94 | InterPro:PapD-like_sf | SUPFAM:SSF49354 | TMHMM:TMhelix |
| UniParc:UPI0001BA910C | InterPro:VAP | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr17:-:11454152..11458701
Molecular Weight (calculated)
26417.7 Da
IEP (calculated)
8.100
GRAVY (calculated)
-0.431
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTGELLNIE PLELKFPFEL KKQISCSLQL SNKTDSYVAF KVKTTNPKKY CVRPNTGVVT PRSTCDVIVT MQAQKEAPAD MQCKDKFLLQ SVKTVDGTSP
101: KDITADMFNK EAGHVVEECK LRVLYVSPPQ PPSPVPEGSE EGSSPRGSVS ENGNANGSDF TQAARGFTER PESQDRSAEA RALISRLTEE KNNAIQQNSK
201: LCQELELLKR EGNKSRGGVS FVIVVLIGLL GIIMGYLMKT T
101: KDITADMFNK EAGHVVEECK LRVLYVSPPQ PPSPVPEGSE EGSSPRGSVS ENGNANGSDF TQAARGFTER PESQDRSAEA RALISRLTEE KNNAIQQNSK
201: LCQELELLKR EGNKSRGGVS FVIVVLIGLL GIIMGYLMKT T
001: MSNELLTIDP VDLQFPFELK KQISCSLYLG NKTDNYVAFK VKTTNPKKYC VRPNTGVVHP RSSSEVLVTM QAQKEAPADL QCKDKFLLQC VVASPGATPK
101: DVTHEMFSKE AGHRVEETKL RVVYVAPPRP PSPVREGSEE GSSPRASVSD NGNASDFTAA PRFSADRVDA QDNSSEARAL VTKLTEEKNS AVQLNNRLQQ
201: ELDQLRRESK RSKSGGIPFM YVLLVGLIGL ILGYIMKRT
101: DVTHEMFSKE AGHRVEETKL RVVYVAPPRP PSPVREGSEE GSSPRASVSD NGNASDFTAA PRFSADRVDA QDNSSEARAL VTKLTEEKNS AVQLNNRLQQ
201: ELDQLRRESK RSKSGGIPFM YVLLVGLIGL ILGYIMKRT
Arabidopsis Description
PVA12Vesicle-associated protein 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHC8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.