CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plasma membrane 2
mitochondrion 1
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50932	Soybean	cytosol	93.56	93.56
KRH11275	Soybean	cytosol	62.37	66.19
VIT_05s0020g01970.t01	Wine grape	cytosol	58.64	59.04
KRH28066	Soybean	cytosol	31.53	51.96
KRH57391	Soybean	endoplasmic reticulum, mitochondrion	39.32	48.13
KRH04117	Soybean	cytosol, nucleus, plasma membrane	38.64	47.3
KRH76164	Soybean	endoplasmic reticulum	38.31	46.89
KRH65384	Soybean	cytosol	38.31	46.89
KRH77373	Soybean	endoplasmic reticulum	37.29	45.64
GSMUA_Achr8P21990_001	Banana	cytosol	44.41	43.52
GSMUA_Achr10P...	Banana	cytosol	44.07	43.33
PGSC0003DMT400027619	Potato	cytosol	51.53	42.82
KRH04206	Soybean	cytosol	31.53	41.89
KRH57501	Soybean	plasma membrane	29.49	41.23
GSMUA_Achr3P08840_001	Banana	cytosol	33.22	40.83
KRH28185	Soybean	cytosol, golgi, nucleus	29.83	40.18
TraesCS3D01G462100.3	Wheat	cytosol	46.78	38.02
TraesCS3A01G467600.2	Wheat	cytosol	46.44	37.74
TraesCS3B01G511900.2	Wheat	cytosol	46.1	37.47
HORVU3Hr1G099730.5	Barley	cytosol	46.1	36.17
KRH77304	Soybean	plasma membrane, vacuole	30.51	36.14
Solyc01g067720.2.1	Tomato	plastid	50.51	35.99
Os01t0936800-01	Rice	cytosol, plasma membrane	45.42	35.26
EES04183	Sorghum	cytosol	44.07	34.48
Zm00001d011904_P001	Maize	cytosol	43.73	32.99
Zm00001d042180_P002	Maize	cytosol	44.07	32.42
KXG21863	Sorghum	cytosol	38.98	31.77
KRG92793	Soybean	cytosol	50.51	30.98
Zm00001d010495_P002	Maize	cytosol	39.32	30.53
KRH34006	Soybean	cytosol	51.86	28.87
Os05t0373000-01	Rice	cytosol	41.02	25.37

Protein Annotations

EntrezGene:100801987	Gene3D:2.60.40.10	MapMan:20.7.1	EMBL:ACUP02010299	EMBL:BT097077	UniProt:C6THF6
ncoils:Coil	EnsemblPlantsGene:GLYMA_17G022400	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000535	InterPro:IPR013783
InterPro:Ig-like_fold	EnsemblPlants:KRH02189	ProteinID:KRH02189	ProteinID:KRH02189.1	InterPro:MSP_dom	PFAM:PF00635
PIRSF:PIRSF019693	PFscan:PS50202	PANTHER:PTHR10809	PANTHER:PTHR10809:SF66	InterPro:PapD-like_sf	SUPFAM:SSF49354
TMHMM:TMhelix	UniParc:UPI0001B17007	InterPro:VAP	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr17:+:1640140..1643392

Molecular Weight (calculated)

33229.2 Da

IEP (calculated)

6.679

GRAVY (calculated)

-0.483

Length

295 amino acids

Sequence
(BLAST)

001: MATHLLHIEP AELRFVFELK KQSSCLVQLA NNTDHFLAFK VKTTSPKKYC VRPNIGIIKP NDKCDFTVTM QAQRMAPPDM LCKDKFLIQS TVVPVGTTED
101: DITSDMFAKD SGKFIEEKKL RVVLISPPSS PVLLPVNGDM KHDPSNEINV QKDRLPSGVE NIPPPRKVSE EVKGLEPAQD MKEDRADEDI VPRQAENVGD
201: MKPAKDDVQS NLANESEELK SKLSVMDSKL REAEVTITKL NEERRRNTQE KDLLKKELEV LKRQINTKGN QAGFPFLFVC MVALISVAVG YYIHP

Best Arabidopsis Sequence Match ( AT1G08820.1 )
(BLAST)

001: MNMPLLDIQP RTLQFAVDLK KQTSCVVQLT NTTHHYVAFK VKTTSPKKYC VRPNVGVVAP KSTCEFTVIM QAFKEPPPDM VCKDKFLIQS TAVSAETTDE
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT

Arabidopsis Description

PVA22VAP27-2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.