CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010495_P002	Maize	cytosol	86.19	82.11
GSMUA_Achr8P21990_001	Banana	cytosol	39.5	47.51
Os05t0373000-01	Rice	cytosol	60.77	46.12
GSMUA_Achr10P...	Banana	cytosol	36.46	44.0
KXG24454	Sorghum	cytosol	27.9	41.91
EES12559	Sorghum	cytosol	28.73	41.77
VIT_05s0020g01970.t01	Wine grape	cytosol	33.15	40.96
KXG31128	Sorghum	cytosol	25.41	40.89
GSMUA_Achr3P08840_001	Banana	cytosol	27.07	40.83
EES14570	Sorghum	cytosol, nucleus, plasma membrane	26.8	39.75
KRH50932	Soybean	cytosol	32.04	39.32
EES04183	Sorghum	cytosol	40.88	39.26
KRH11275	Soybean	cytosol	30.11	39.21
KRH02189	Soybean	cytosol	31.77	38.98
Solyc01g098200.2.1	Tomato	cytosol	33.98	38.92
VIT_14s0030g00730.t01	Wine grape	cytosol	35.91	38.69
PGSC0003DMT400057834	Potato	cytosol	33.7	38.61
PGSC0003DMT400027619	Potato	cytosol	35.64	36.34
EER91402	Sorghum	cytosol	26.24	34.93
KXG26858	Sorghum	cytosol, plastid	23.48	34.84
CDY06330	Canola	cytosol	31.77	33.53
Bra031641.1-P	Field mustard	cytosol	31.77	33.53
EES07504	Sorghum	plastid	24.31	33.08
Solyc01g067720.2.1	Tomato	plastid	34.81	30.43
CDX95029	Canola	cytosol	30.66	29.68
CDX93534	Canola	cytosol	30.39	29.65
Bra018597.1-P	Field mustard	cytosol	30.11	29.38
CDY31124	Canola	cytosol	29.83	28.35
Bra030744.1-P	Field mustard	cytosol	30.66	28.24
AT1G08820.3	Thale cress	cytosol	30.11	28.24
CDY32136	Canola	cytosol	29.56	28.16
CDY22664	Canola	plasma membrane	31.49	26.89
EES05798	Sorghum	plastid	24.03	26.85
OQU79125	Sorghum	cytosol	12.98	24.48
KRG92793	Soybean	cytosol	30.11	22.66
KRH34006	Soybean	cytosol	30.39	20.75

Protein Annotations

Gene3D:2.60.40.10	MapMan:20.7.1	UniProt:A0A1B6P866	ncoils:Coil	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	GO:GO:0016021
InterPro:IPR000535	InterPro:IPR013783	InterPro:Ig-like_fold	EnsemblPlants:KXG21863	ProteinID:KXG21863	ProteinID:KXG21863.1
InterPro:MSP_dom	PFAM:PF00635	PIRSF:PIRSF019693	PFscan:PS50202	PANTHER:PTHR10809	PANTHER:PTHR10809:SF89
InterPro:PapD-like_sf	EnsemblPlantsGene:SORBI_3009G118200	SUPFAM:SSF49354	TMHMM:TMhelix	UniParc:UPI00081AD93F	InterPro:VAP
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:46329478..46336125

Molecular Weight (calculated)

39768.8 Da

IEP (calculated)

5.774

GRAVY (calculated)

-0.177

Length

362 amino acids

Sequence
(BLAST)

001: MGSEDALVEI HPGELRFLVE VKKKSSCCIR LVNKSDQYVA FKVKTTSPKK YCVRPNIGVI LPLASRDFTV TMQALKNAPL DLQTKDKFLV QTTVVPFGTA
101: DEGIVPAFFS KETGQYIEEK KLKVVTVSIT EPQVQQLING VPHAKETAGV LVTEQTLDNV NEAPNVANEV PNSLKASFPS LSETAAFNEN SSPVNECPTI
201: LQDFLVPPKQ TSFTLLEFAS NLQETSVASI ETHFSSTEAS VDLKESPPPE YTPAPSEVPS LSDKESTSAD NVHIPQQVTK DVQNLPMKLN NLEVKLEEAK
301: TLIVKLREAN RATIQERDKL RKEMVLLKRA GAARSQSSTG FPLLFVIYMA VVGISLGYLL HL

Best Arabidopsis Sequence Match ( AT4G00170.1 )
(BLAST)

001: MTTGDLVNIH PTELKFPFEL KKQSSCSMQL TNKTTTQCVA FKVKTTNPRK YCVRPNTGVV LPGDSCNVTV TMQAQKEAPL DMQCKDKFLV QTVVVSDGTT
101: SKEVLAEMFN KEAGRVIEDF KLRVVYIPAN PPSPVPEGSE EGNSPMASLN DIASQSASLF DDVSRTFEET SEKSSEAWSM ISKLTEEKTS ATQQSQKLRL
201: ELEMLRKETS KKQSGGHSLL LMLLVGLLGC VIGYLLNRI

Arabidopsis Description

PVA13Vesicle-associated protein 1-3 [Source:UniProtKB/Swiss-Prot;Acc:Q84WW5]
SUBAcon: [peroxisome,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.