Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31124 | Canola | cytosol | 96.58 | 96.33 |
| Bra030744.1-P | Field mustard | cytosol | 95.79 | 92.62 |
| CDX95029 | Canola | cytosol | 85.26 | 86.63 |
| CDX93534 | Canola | cytosol | 84.47 | 86.52 |
| CDY06330 | Canola | cytosol | 71.58 | 79.3 |
| AT1G08820.3 | Thale cress | cytosol | 78.16 | 76.94 |
| CDY22664 | Canola | plasma membrane | 73.16 | 65.57 |
| VIT_14s0030g00730.t01 | Wine grape | cytosol | 41.84 | 47.32 |
| GSMUA_Achr8P21990_001 | Banana | cytosol | 34.21 | 43.19 |
| PGSC0003DMT400057834 | Potato | cytosol | 35.0 | 42.09 |
| GSMUA_Achr10P... | Banana | cytosol | 33.16 | 42.0 |
| Solyc01g098200.2.1 | Tomato | cytosol | 34.74 | 41.77 |
| GSMUA_Achr3P08840_001 | Banana | cytosol | 26.05 | 41.25 |
| CDX91914 | Canola | cytosol | 25.53 | 41.1 |
| CDX74330 | Canola | cytosol | 25.53 | 41.1 |
| CDX71796 | Canola | cytosol | 25.53 | 40.76 |
| CDY41153 | Canola | cytosol | 25.53 | 40.76 |
| CDX89063 | Canola | cytosol, golgi, plasma membrane | 25.53 | 40.59 |
| CDY48365 | Canola | cytosol | 25.53 | 40.59 |
| CDY37029 | Canola | cytosol, golgi, plasma membrane | 25.26 | 40.17 |
| CDX67837 | Canola | cytosol, golgi, plasma membrane | 25.26 | 40.0 |
| CDY27392 | Canola | cytosol, golgi, plasma membrane | 25.0 | 39.75 |
| CDX83400 | Canola | cytosol, nucleus, plasma membrane | 25.0 | 39.42 |
| CDY56247 | Canola | cytosol | 24.74 | 39.17 |
| CDX95631 | Canola | cytosol, golgi, plasma membrane | 24.74 | 39.0 |
| CDY57247 | Canola | cytosol | 24.21 | 38.33 |
| CDY40565 | Canola | cytosol | 21.58 | 37.61 |
| CDY28969 | Canola | cytosol | 21.58 | 37.61 |
| CDY33519 | Canola | cytosol | 21.32 | 37.16 |
| CDX77746 | Canola | cytosol | 21.32 | 37.16 |
| CDY43438 | Canola | cytosol | 20.79 | 35.91 |
| CDY25982 | Canola | cytosol | 20.53 | 35.45 |
| Os01t0936800-01 | Rice | cytosol, plasma membrane | 34.21 | 34.21 |
| TraesCS3D01G462100.3 | Wheat | cytosol | 32.37 | 33.88 |
| TraesCS3A01G467600.2 | Wheat | cytosol | 32.37 | 33.88 |
| TraesCS3B01G511900.2 | Wheat | cytosol | 32.37 | 33.88 |
| EES04183 | Sorghum | cytosol | 33.16 | 33.42 |
| HORVU3Hr1G099730.5 | Barley | cytosol | 32.37 | 32.71 |
| KRG92793 | Soybean | cytosol | 41.05 | 32.43 |
| Zm00001d011904_P001 | Maize | cytosol | 33.16 | 32.23 |
| Zm00001d042180_P002 | Maize | cytosol | 33.68 | 31.92 |
| CDY44556 | Canola | cytosol, extracellular, plastid | 8.42 | 31.37 |
| KRH34006 | Soybean | cytosol | 41.84 | 30.0 |
| KXG21863 | Sorghum | cytosol | 28.16 | 29.56 |
| Zm00001d010495_P002 | Maize | cytosol | 29.21 | 29.21 |
| Os05t0373000-01 | Rice | cytosol | 28.95 | 23.06 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:20.7.1 | GO:A0A078H2X1 | UniProt:A0A078H2X1 | EnsemblPlants:CDY32136 | ProteinID:CDY32136 |
| ProteinID:CDY32136.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00051503001 | InterPro:IPR000535 |
| InterPro:IPR013783 | InterPro:Ig-like_fold | InterPro:MSP_dom | PFAM:PF00635 | PFscan:PS50202 | PANTHER:PTHR10809 |
| PANTHER:PTHR10809:SF45 | InterPro:PapD-like_sf | SUPFAM:SSF49354 | TMHMM:TMhelix | UniParc:UPI0004EE98B5 | InterPro:VAP |
Description
BnaCnng06450DBnaCnng06450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2X1]
Coordinates
chrLK032288:-:39774..43258
Molecular Weight (calculated)
42609.3 Da
IEP (calculated)
6.792
GRAVY (calculated)
-0.518
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMPLLDIQP RTLKFVVDLK KQSTCVVQLT NTTHLFVAFK VKTTSPKKYC VRPNVGVVAP KSTCEFSVIM QAFKEPPPDM ACKDKFLIQS TAVPEETTDE
101: DITASMFSKA EGKHIEENKL RVTLVMASDS PELSPIKGTL KQEAVFEDSI PKDRLHGQSE TLPPQYESEI VKEPPRMVGH DELKQPRKGV IDFIENDIKA
201: TKGGGYDSSK MAKEADSDLI RSHKDEDDGR GIKPTHDLGT TTNMAMDLSG DQGFANGKTS ANSVTYPEEP KMHRDRDVVQ QKKTDAQNIK ALDEYKLVKD
301: IEEMKLKVNA LESKLKQADS TFSKLMEERS ISSQHRESLQ QELAEMRTKK IVKEVHIGFP LLFVCVVAFI SIVIGYCLRT
101: DITASMFSKA EGKHIEENKL RVTLVMASDS PELSPIKGTL KQEAVFEDSI PKDRLHGQSE TLPPQYESEI VKEPPRMVGH DELKQPRKGV IDFIENDIKA
201: TKGGGYDSSK MAKEADSDLI RSHKDEDDGR GIKPTHDLGT TTNMAMDLSG DQGFANGKTS ANSVTYPEEP KMHRDRDVVQ QKKTDAQNIK ALDEYKLVKD
301: IEEMKLKVNA LESKLKQADS TFSKLMEERS ISSQHRESLQ QELAEMRTKK IVKEVHIGFP LLFVCVVAFI SIVIGYCLRT
001: MNMPLLDIQP RTLQFAVDLK KQTSCVVQLT NTTHHYVAFK VKTTSPKKYC VRPNVGVVAP KSTCEFTVIM QAFKEPPPDM VCKDKFLIQS TAVSAETTDE
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT
Arabidopsis Description
PVA22VAP27-2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.