Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol, plastid
Predictor Summary:
Predictor Summary:
- extracellular 3
- golgi 2
- plasma membrane 2
- endoplasmic reticulum 2
- vacuole 2
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035442.1-P | Field mustard | cytosol | 67.65 | 63.89 |
| AT2G23830.1 | Thale cress | cytosol | 45.1 | 30.87 |
| PGSC0003DMT400076826 | Potato | cytosol | 14.71 | 25.0 |
| CDX83400 | Canola | cytosol, nucleus, plasma membrane | 46.08 | 19.5 |
| CDY41153 | Canola | cytosol | 45.1 | 19.33 |
| CDX71796 | Canola | cytosol | 45.1 | 19.33 |
| CDX89063 | Canola | cytosol, golgi, plasma membrane | 44.12 | 18.83 |
| CDY27392 | Canola | cytosol, golgi, plasma membrane | 44.12 | 18.83 |
| CDY48365 | Canola | cytosol | 44.12 | 18.83 |
| CDY37029 | Canola | cytosol, golgi, plasma membrane | 44.12 | 18.83 |
| CDX67837 | Canola | cytosol, golgi, plasma membrane | 44.12 | 18.75 |
| CDY57247 | Canola | cytosol | 44.12 | 18.75 |
| CDY56247 | Canola | cytosol | 44.12 | 18.75 |
| CDX95631 | Canola | cytosol, golgi, plasma membrane | 44.12 | 18.67 |
| Solyc06g034220.2.1 | Tomato | nucleus | 41.18 | 18.5 |
| VIT_15s0048g00220.t01 | Wine grape | cytosol, nucleus, plasma membrane | 43.14 | 18.41 |
| KRH76164 | Soybean | endoplasmic reticulum | 43.14 | 18.26 |
| KRH65384 | Soybean | cytosol | 43.14 | 18.26 |
| PGSC0003DMT400055602 | Potato | cytosol, golgi, plasma membrane | 40.2 | 18.06 |
| Zm00001d051288_P001 | Maize | cytosol | 38.24 | 17.33 |
| Zm00001d017390_P001 | Maize | cytosol | 38.24 | 17.33 |
| KXG31128 | Sorghum | cytosol | 38.24 | 17.33 |
| TraesCS7D01G296400.1 | Wheat | cytosol | 40.2 | 16.87 |
| TraesCS7A01G300700.1 | Wheat | cytosol | 40.2 | 16.87 |
| Solyc10g018350.1.1 | Tomato | cytosol | 39.22 | 16.81 |
| Solyc01g090910.2.1 | Tomato | nucleus | 38.24 | 16.74 |
| TraesCS6D01G220300.1 | Wheat | cytosol | 37.25 | 16.67 |
| TraesCS6B01G266100.1 | Wheat | cytosol, golgi, plasma membrane | 37.25 | 16.67 |
| TraesCS6A01G237600.1 | Wheat | cytosol, golgi, plasma membrane | 37.25 | 16.67 |
| GSMUA_Achr11P... | Banana | cytosol | 32.35 | 16.5 |
| Os08t0156700-01 | Rice | plasma membrane | 39.22 | 16.46 |
| Zm00001d049553_P001 | Maize | plasma membrane | 39.22 | 16.39 |
| EES14570 | Sorghum | cytosol, nucleus, plasma membrane | 39.22 | 16.39 |
| GSMUA_Achr1P20280_001 | Banana | cytosol | 34.31 | 16.36 |
| HORVU6Hr1G060760.3 | Barley | cytosol, golgi, plasma membrane | 36.27 | 16.23 |
| CDX74330 | Canola | cytosol | 36.27 | 15.68 |
| CDX91914 | Canola | cytosol | 36.27 | 15.68 |
| HORVU2Hr1G091830.4 | Barley | cytosol | 38.24 | 15.66 |
| TraesCS2A01G368500.1 | Wheat | cytosol | 38.24 | 15.66 |
| TraesCS2B01G385700.2 | Wheat | cytosol | 38.24 | 15.66 |
| TraesCS2D01G365300.2 | Wheat | cytosol | 38.24 | 15.66 |
| GSMUA_Achr5P20880_001 | Banana | cytosol | 36.27 | 15.48 |
| PGSC0003DMT400066920 | Potato | cytosol | 40.2 | 15.36 |
| EES12559 | Sorghum | cytosol | 37.25 | 15.26 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plasma membrane | 35.29 | 15.06 |
| Os02t0643000-01 | Rice | plasma membrane | 38.24 | 15.06 |
| Zm00001d036342_P001 | Maize | cytosol | 36.27 | 14.8 |
| Os04t0534400-01 | Rice | cytosol | 36.27 | 14.8 |
| CDY40565 | Canola | cytosol | 31.37 | 14.68 |
| CDY28969 | Canola | cytosol | 31.37 | 14.68 |
| CDX77746 | Canola | cytosol | 31.37 | 14.68 |
| CDY33519 | Canola | cytosol | 31.37 | 14.68 |
| GSMUA_Achr8P11120_001 | Banana | cytosol | 40.2 | 14.64 |
| CDY43438 | Canola | cytosol | 31.37 | 14.55 |
| CDY25982 | Canola | cytosol | 31.37 | 14.55 |
| HORVU7Hr1G071270.2 | Barley | mitochondrion | 40.2 | 13.9 |
| Zm00001d025939_P003 | Maize | cytosol, golgi, plasma membrane | 36.27 | 12.42 |
| CDY06330 | Canola | cytosol | 33.33 | 9.91 |
| CDX95029 | Canola | cytosol | 31.37 | 8.56 |
| CDY32136 | Canola | cytosol | 31.37 | 8.42 |
| CDY31124 | Canola | cytosol | 31.37 | 8.4 |
| CDX93534 | Canola | cytosol | 30.39 | 8.36 |
| CDY22664 | Canola | plasma membrane | 33.33 | 8.02 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:35.1 | GO:A0A078I3X7 | UniProt:A0A078I3X7 | EnsemblPlants:CDY44556 | ProteinID:CDY44556 |
| ProteinID:CDY44556.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005789 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00080361001 | InterPro:IPR000535 | InterPro:IPR013783 |
| InterPro:Ig-like_fold | InterPro:MSP_dom | PFAM:PF00635 | PFscan:PS50202 | PANTHER:PTHR10809 | PANTHER:PTHR10809:SF94 |
| InterPro:PapD-like_sf | SUPFAM:SSF49354 | TMHMM:TMhelix | UniParc:UPI0004EF31E9 | InterPro:VAP | SEG:seg |
Description
BnaA01g21830DBnaA01g21830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3X7]
Coordinates
chrLK032594:+:165448..165953
Molecular Weight (calculated)
11977.5 Da
IEP (calculated)
6.575
GRAVY (calculated)
0.036
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNKELLTIV PMTLQFPFEL EKPISCYFYL KNQTDNNVAF KMNNPGNYSV RPTSGVVLPR SISKVNGLFF DLFLSEFIYI YIYIYIYIYQ SVGESISQQD
101: FR
101: FR
001: MSNIDLIGMS NRDLIGMSNS ELLTVEPLDL QFPFELKKQI SCSLYLTNKT DNNVAFKVKT TNPKKYCVRP NTGVVLPRST CEVLVTMQAQ KEAPSDMQCK
101: DKFLLQGVIA SPGVTAKEVT PEMFSKEAGH RVEETKLRVT YVAPPRPPSP VHEGSEEGSS PRASVSDNGH GSEFSIFMFN FSLRDLSWTT RLDIKKTHLR
201: YFSQFFQVCH RQNHVTSSFA FALFKTDFWR
101: DKFLLQGVIA SPGVTAKEVT PEMFSKEAGH RVEETKLRVT YVAPPRPPSP VHEGSEEGSS PRASVSDNGH GSEFSIFMFN FSLRDLSWTT RLDIKKTHLR
201: YFSQFFQVCH RQNHVTSSFA FALFKTDFWR
Arabidopsis Description
PVA11Vesicle-associated protein 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ95]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.