CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32136	Canola	cytosol	96.33	96.58
Bra030744.1-P	Field mustard	cytosol	97.64	94.66
CDX95029	Canola	cytosol	85.83	87.43
CDX93534	Canola	cytosol	84.51	86.79
CDY06330	Canola	cytosol	70.87	78.72
AT1G08820.3	Thale cress	cytosol	77.43	76.42
CDY22664	Canola	plasma membrane	72.18	64.86
VIT_14s0030g00730.t01	Wine grape	cytosol	41.73	47.32
GSMUA_Achr8P21990_001	Banana	cytosol	34.12	43.19
PGSC0003DMT400057834	Potato	cytosol	34.91	42.09
GSMUA_Achr10P...	Banana	cytosol	33.07	42.0
CDX91914	Canola	cytosol	25.72	41.53
CDX74330	Canola	cytosol	25.72	41.53
Solyc01g098200.2.1	Tomato	cytosol	34.38	41.46
GSMUA_Achr3P08840_001	Banana	cytosol	25.98	41.25
CDX71796	Canola	cytosol	25.46	40.76
CDY41153	Canola	cytosol	25.46	40.76
CDX89063	Canola	cytosol, golgi, plasma membrane	25.46	40.59
CDY48365	Canola	cytosol	25.46	40.59
CDY37029	Canola	cytosol, golgi, plasma membrane	25.2	40.17
CDX67837	Canola	cytosol, golgi, plasma membrane	25.2	40.0
CDY27392	Canola	cytosol, golgi, plasma membrane	24.93	39.75
CDX83400	Canola	cytosol, nucleus, plasma membrane	24.93	39.42
CDY56247	Canola	cytosol	24.67	39.17
CDX95631	Canola	cytosol, golgi, plasma membrane	24.67	39.0
CDY57247	Canola	cytosol	24.15	38.33
CDY40565	Canola	cytosol	21.78	38.07
CDY28969	Canola	cytosol	21.78	38.07
CDY33519	Canola	cytosol	21.52	37.61
CDX77746	Canola	cytosol	21.52	37.61
CDY43438	Canola	cytosol	21.0	36.36
CDY25982	Canola	cytosol	20.73	35.91
Os01t0936800-01	Rice	cytosol, plasma membrane	34.12	34.21
TraesCS3D01G462100.3	Wheat	cytosol	32.28	33.88
TraesCS3A01G467600.2	Wheat	cytosol	32.28	33.88
TraesCS3B01G511900.2	Wheat	cytosol	32.28	33.88
EES04183	Sorghum	cytosol	33.07	33.42
KRG92793	Soybean	cytosol	41.73	33.06
HORVU3Hr1G099730.5	Barley	cytosol	32.28	32.71
Zm00001d011904_P001	Maize	cytosol	33.07	32.23
Zm00001d042180_P002	Maize	cytosol	33.6	31.92
CDY44556	Canola	cytosol, extracellular, plastid	8.4	31.37
KRH34006	Soybean	cytosol	42.52	30.57
KXG21863	Sorghum	cytosol	28.35	29.83
Zm00001d010495_P002	Maize	cytosol	29.4	29.47
Os05t0373000-01	Rice	cytosol	29.4	23.48

Protein Annotations

Gene3D:2.60.40.10	MapMan:20.7.1	GO:A0A078H133	UniProt:A0A078H133	EnsemblPlants:CDY31124	ProteinID:CDY31124
ProteinID:CDY31124.1	ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00047209001	InterPro:IPR000535
InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:MSP_dom	PFAM:PF00635	PFscan:PS50202	PANTHER:PTHR10809
PANTHER:PTHR10809:SF45	InterPro:PapD-like_sf	SUPFAM:SSF49354	TMHMM:TMhelix	UniParc:UPI0004EEDF25	InterPro:VAP

Description

BnaA08g26740DBnaA08g26740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H133]

Coordinates

chrLK032267:+:329930..333286

Molecular Weight (calculated)

42601.4 Da

IEP (calculated)

6.792

GRAVY (calculated)

-0.500

Length

381 amino acids

Sequence
(BLAST)

001: MNMPLLDIQP RTLKFVVDLK KQSTCVVQLT NTTHLFVAFK VKTTSPKKYC VRPNVGVVAP KSTCEFSVIM QAFKEPPPDM ACKDKFLIQS TAVPEETTDE
101: DITASMFAKA EGKHIEENKL RVTLVMASDS PELSPIKGTL KQEAVFEDSI PKDRLHGQSE TLPPQYESEI VKEPPRMVGH DELKQPRKGV MDFIENDIKA
201: TKGGGYDTSK MAKEAESDPT IKSHKVEDDG RGIKPTHDLG TTTNMAMDLS GDQGFANGKT SANSVTYPEE PKIHRDRDVV PQQKTDAQNS KALDEYKLVK
301: DIEEMKLKVN ALESKLKQAD STISKLMEER SISSQHRESL QQELAEMRMK KIVKEVHIGF PLLFVCVVAF ISIVIGYCLR T

Best Arabidopsis Sequence Match ( AT1G08820.2 )
(BLAST)

001: MNMPLLDIQP RTLQFAVDLK KQTSCVVQLT NTTHHYVAFK VKTTSPKKYC VRPNVGVVAP KSTCEFTVIM QAFKEPPPDM VCKDKFLIQS TAVSAETTDE
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT

Arabidopsis Description

PVA22VAP27-2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.