CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34006	Soybean	cytosol	90.64	82.26
KRH02189	Soybean	cytosol	30.98	50.51
KRH50932	Soybean	cytosol	30.77	50.17
VIT_14s0030g00730.t01	Wine grape	cytosol	34.51	49.4
KRH28066	Soybean	cytosol	17.05	45.81
GSMUA_Achr8P21990_001	Banana	cytosol	27.44	43.85
KRH11275	Soybean	cytosol	25.16	43.53
AT1G08820.3	Thale cress	cytosol	34.3	42.75
CDX93534	Canola	cytosol	32.85	42.59
Bra018597.1-P	Field mustard	cytosol	32.64	42.32
CDX95029	Canola	cytosol	32.85	42.25
PGSC0003DMT400057834	Potato	cytosol	27.65	42.09
Solyc01g098200.2.1	Tomato	cytosol	27.65	42.09
CDY06330	Canola	cytosol	29.94	41.98
Bra031641.1-P	Field mustard	cytosol	29.94	41.98
CDY31124	Canola	cytosol	33.06	41.73
KRH04117	Soybean	cytosol, nucleus, plasma membrane	20.79	41.49
KRH57391	Soybean	endoplasmic reticulum, mitochondrion	20.79	41.49
KRH65384	Soybean	cytosol	20.79	41.49
KRH76164	Soybean	endoplasmic reticulum	20.79	41.49
CDY32136	Canola	cytosol	32.43	41.05
GSMUA_Achr3P08840_001	Banana	cytosol	20.37	40.83
Bra030744.1-P	Field mustard	cytosol	33.26	40.71
KRH77373	Soybean	endoplasmic reticulum	19.96	39.83
GSMUA_Achr10P...	Banana	cytosol	24.53	39.33
KRH04206	Soybean	cytosol	18.09	39.19
KRH57501	Soybean	plasma membrane	16.84	38.39
KRH28185	Soybean	cytosol, golgi, nucleus	17.26	37.9
TraesCS3D01G462100.3	Wheat	cytosol	28.48	37.74
TraesCS3B01G511900.2	Wheat	cytosol	28.27	37.47
TraesCS3A01G467600.2	Wheat	cytosol	28.07	37.19
HORVU3Hr1G099730.5	Barley	cytosol	28.48	36.44
EES04183	Sorghum	cytosol	27.86	35.54
Zm00001d011904_P001	Maize	cytosol	28.27	34.78
Os01t0936800-01	Rice	cytosol, plasma membrane	27.44	34.74
CDY22664	Canola	plasma membrane	30.35	34.43
Zm00001d042180_P002	Maize	cytosol	28.27	33.92
KRH77304	Soybean	plasma membrane, vacuole	17.05	32.93
KXG21863	Sorghum	cytosol	22.66	30.11
Zm00001d010495_P002	Maize	cytosol	22.66	28.68
Os05t0373000-01	Rice	cytosol	24.53	24.74

Protein Annotations

EntrezGene:100779920	Gene3D:2.60.40.10	MapMan:20.7.1	UniProt:A0A0R0EF48	EMBL:ACUP02012768	ncoils:Coil
EnsemblPlantsGene:GLYMA_20G230200	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005789	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000535	InterPro:IPR013783	InterPro:Ig-like_fold
EnsemblPlants:KRG92793	ProteinID:KRG92793	ProteinID:KRG92793.1	ProteinID:KRG92794.1	ProteinID:KRG92795.1	InterPro:MSP_dom
PFAM:PF00635	PFscan:PS50202	PANTHER:PTHR10809	PANTHER:PTHR10809:SF45	InterPro:PapD-like_sf	SUPFAM:SSF49354
TMHMM:TMhelix	UniParc:UPI0003DE952D	InterPro:VAP	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr20:+:46426659..46432108

Molecular Weight (calculated)

55131.2 Da

IEP (calculated)

6.556

GRAVY (calculated)

-0.594

Length

481 amino acids

Sequence
(BLAST)

001: MSKAPLLQIE PKELKFIFEL KKQSSCSVQL TNNTNHYVAF KIKTTSPKKY SVRPNVGVLA PKATCEFIVT MQPQREAPED MVCKDKFLIQ STKVPAETIS
101: EDVTSRLFVK DGSKYIEENK LKVTLICPPN SPDLSPINGD FKNGLDHEKV QIYSKDEIQS PETMVRGRFT NVLKNPDMVH EVLELEEDME LRPEYYVGHT
201: MKHVGEPKEE ARLKVSKNKE LNMVKDLEEL KPQKKLEVEV PKDLDLNKIK NAEELKPEKA AELKVSKLLV LNKVKNVEEL KPEKAAELNV SKVLDLNLVN
301: NVKELKPETE TELKMSKDLE LKTVKNAEEL KPEKETELKI SKDMELETFK NVEELKPENE IELKITKDRE FRTVKNVEEL KPGKEAELRV SESIEQLKLL
401: KAIEEMKLKL DGLESKLNES GVTISKLTEE RRLSNQETKI LQEKLADLIN KGPRKVQVGF PLLYVCMVAL ICVFLGYRLH S

Best Arabidopsis Sequence Match ( AT1G08820.2 )
(BLAST)

001: MNMPLLDIQP RTLQFAVDLK KQTSCVVQLT NTTHHYVAFK VKTTSPKKYC VRPNVGVVAP KSTCEFTVIM QAFKEPPPDM VCKDKFLIQS TAVSAETTDE
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT

Arabidopsis Description

PVA22VAP27-2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.