Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77373 | Soybean | endoplasmic reticulum | 96.65 | 71.78 |
| VIT_13s0106g00400.t01 | Wine grape | cytosol | 49.16 | 64.71 |
| KRH04117 | Soybean | cytosol, nucleus, plasma membrane | 83.24 | 61.83 |
| KRH57391 | Soybean | endoplasmic reticulum, mitochondrion | 83.24 | 61.83 |
| PGSC0003DMT400032484 | Potato | cytosol, nucleus, plasma membrane | 69.27 | 58.49 |
| KRH65384 | Soybean | cytosol | 73.18 | 54.36 |
| KRH76164 | Soybean | endoplasmic reticulum | 73.18 | 54.36 |
| VIT_02s0154g00500.t01 | Wine grape | cytosol, nucleus, plasma membrane | 71.51 | 53.78 |
| Solyc08g078690.2.1 | Tomato | cytosol | 63.69 | 51.35 |
| KRH28185 | Soybean | cytosol, golgi, nucleus | 43.02 | 35.16 |
| KRH04206 | Soybean | cytosol | 41.34 | 33.33 |
| KRH57501 | Soybean | plasma membrane | 38.55 | 32.7 |
| KRH50932 | Soybean | cytosol | 52.51 | 31.86 |
| KRH02189 | Soybean | cytosol | 51.96 | 31.53 |
| KRH77304 | Soybean | plasma membrane, vacuole | 42.46 | 30.52 |
| KRH11275 | Soybean | cytosol | 44.69 | 28.78 |
| KRG92793 | Soybean | cytosol | 45.81 | 17.05 |
| KRH34006 | Soybean | cytosol | 48.04 | 16.23 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:20.7.1 | UniProt:A0A0R0HBI0 | EMBL:ACUP02006740 | EnsemblPlantsGene:GLYMA_11G0320001 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 |
| InterPro:IPR000535 | InterPro:IPR013783 | InterPro:Ig-like_fold | ProteinID:KRH28065.1 | EnsemblPlants:KRH28066 | ProteinID:KRH28066 |
| ProteinID:KRH28066.1 | InterPro:MSP_dom | PFAM:PF00635 | PIRSF:PIRSF019693 | PFscan:PS50202 | PANTHER:PTHR10809 |
| PANTHER:PTHR10809:SF94 | InterPro:PapD-like_sf | SUPFAM:SSF49354 | UniParc:UPI0006EDC684 | InterPro:VAP | SEG:seg |
Description
hypothetical protein
Coordinates
chr11:-:2338090..2339499
Molecular Weight (calculated)
19434.1 Da
IEP (calculated)
5.072
GRAVY (calculated)
-0.366
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTGDLLSIE PLELKFFFEL KKQISCSLIL SNKTDSYIAF KVKTTNPKKY CVRPNTGVVM PQSTCDVIVT MQAQKDAPAD MQCKDKFLLQ SVKVDDGTTA
101: KDITAEMFNK EAGHVVEECK LRVVYVSPTQ PPSPVPEGSE EGSSPRGSVS DNGNVSGVDS AAVARAFVER HEGPEKSAE
101: KDITAEMFNK EAGHVVEECK LRVVYVSPTQ PPSPVPEGSE EGSSPRGSVS DNGNVSGVDS AAVARAFVER HEGPEKSAE
001: MSNIDLIGMS NRDLIGMSNS ELLTVEPLDL QFPFELKKQI SCSLYLTNKT DNNVAFKVKT TNPKKYCVRP NTGVVLPRST CEVLVTMQAQ KEAPSDMQCK
101: DKFLLQGVIA SPGVTAKEVT PEMFSKEAGH RVEETKLRVT YVAPPRPPSP VHEGSEEGSS PRASVSDNGH GSEFSIFMFN FSLRDLSWTT RLDIKKTHLR
201: YFSQFFQVCH RQNHVTSSFA FALFKTDFWR
101: DKFLLQGVIA SPGVTAKEVT PEMFSKEAGH RVEETKLRVT YVAPPRPPSP VHEGSEEGSS PRASVSDNGH GSEFSIFMFN FSLRDLSWTT RLDIKKTHLR
201: YFSQFFQVCH RQNHVTSSFA FALFKTDFWR
Arabidopsis Description
PVA11Vesicle-associated protein 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ95]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.