Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- endoplasmic reticulum 4
- cytosol 1
- extracellular 3
- vacuole 4
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28185 | Soybean | cytosol, golgi, nucleus | 83.13 | 94.52 |
| KRH57501 | Soybean | plasma membrane | 64.26 | 75.83 |
| KRH04206 | Soybean | cytosol | 67.07 | 75.23 |
| Solyc08g078000.2.1 | Tomato | nucleus | 59.44 | 67.27 |
| PGSC0003DMT400067515 | Potato | nucleus | 59.44 | 67.27 |
| Solyc08g007200.2.1 | Tomato | unclear | 57.03 | 66.05 |
| PGSC0003DMT400052797 | Potato | cytosol | 56.63 | 65.58 |
| CDY28969 | Canola | cytosol | 55.42 | 63.3 |
| CDY40565 | Canola | cytosol | 55.42 | 63.3 |
| AT5G47180.1 | Thale cress | cytosol | 55.82 | 63.18 |
| Bra022110.1-P | Field mustard | cytosol | 55.02 | 62.84 |
| CDX77746 | Canola | cytosol | 54.22 | 61.93 |
| CDY43438 | Canola | cytosol | 54.62 | 61.82 |
| CDY33519 | Canola | cytosol | 53.82 | 61.47 |
| Bra017499.1-P | Field mustard | cytosol | 54.22 | 61.36 |
| Bra022111.1-P | Field mustard | cytosol | 54.22 | 61.36 |
| CDY25982 | Canola | cytosol | 54.22 | 61.36 |
| Bra024958.1-P | Field mustard | cytosol | 52.61 | 60.09 |
| GSMUA_Achr11P... | Banana | cytosol | 51.41 | 55.65 |
| GSMUA_Achr5P18320_001 | Banana | cytosol, nucleus, plasma membrane | 49.8 | 53.22 |
| TraesCS6D01G224100.1 | Wheat | cytosol, golgi, plasma membrane | 49.4 | 53.02 |
| TraesCS6B01G282300.1 | Wheat | cytosol, golgi, plasma membrane | 49.4 | 53.02 |
| TraesCS6A01G242200.1 | Wheat | cytosol, golgi, plasma membrane | 49.4 | 53.02 |
| Os10t0549100-01 | Rice | plasma membrane | 48.19 | 51.5 |
| Os02t0652550-00 | Rice | cytosol | 49.8 | 46.44 |
| Zm00001d051329_P002 | Maize | mitochondrion, plasma membrane, plastid | 53.82 | 44.37 |
| HORVU6Hr1G062050.9 | Barley | mitochondrion | 51.81 | 44.33 |
| KRH28066 | Soybean | cytosol | 30.52 | 42.46 |
| KRH76164 | Soybean | endoplasmic reticulum | 40.96 | 42.32 |
| KRH65384 | Soybean | cytosol | 40.96 | 42.32 |
| KRH77373 | Soybean | endoplasmic reticulum | 40.56 | 41.91 |
| Zm00001d017448_P001 | Maize | endoplasmic reticulum, golgi, plastid | 51.41 | 41.29 |
| KRH04117 | Soybean | cytosol, nucleus, plasma membrane | 39.76 | 41.08 |
| EES05798 | Sorghum | plastid | 53.01 | 40.74 |
| KRH57391 | Soybean | endoplasmic reticulum, mitochondrion | 39.36 | 40.66 |
| Zm00001d014260_P001 | Maize | plastid | 28.11 | 39.33 |
| KRH11275 | Soybean | cytosol | 34.14 | 30.58 |
| KRH02189 | Soybean | cytosol | 36.14 | 30.51 |
| KRH50932 | Soybean | cytosol | 36.14 | 30.51 |
| VIT_00s0287g00080.t01 | Wine grape | extracellular | 37.75 | 27.01 |
| TraesCS2B01G214400.1 | Wheat | mitochondrion | 26.51 | 24.63 |
| KRG92793 | Soybean | cytosol | 32.93 | 17.05 |
| KRH34006 | Soybean | cytosol | 34.14 | 16.04 |
Protein Annotations
| EntrezGene:100305949 | Gene3D:2.60.40.10 | MapMan:20.7.1 | EMBL:ACUP02000669 | ncoils:Coil | EnsemblPlantsGene:GLYMA_01G205300 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR000535 | InterPro:IPR013783 | InterPro:Ig-like_fold | UniProt:K7K4X2 |
| EnsemblPlants:KRH77304 | ProteinID:KRH77304 | ProteinID:KRH77304.1 | InterPro:MSP_dom | PFAM:PF00635 | PIRSF:PIRSF019693 |
| PFscan:PS50202 | PANTHER:PTHR10809 | PANTHER:PTHR10809:SF42 | InterPro:PapD-like_sf | SUPFAM:SSF49354 | TMHMM:TMhelix |
| UniParc:UPI0002963842 | InterPro:VAP | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:53783308..53787372
Molecular Weight (calculated)
28284.8 Da
IEP (calculated)
8.083
GRAVY (calculated)
-0.362
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLVSPHTIF FLIHFPIHSP FPIPHSPFPN SLLVMTASQL ISVSPDELRF HFELEKQTFC DLKVLNNSQN YVAFKVKTTS PKKYFVRPNT GVVQPWDSCI
101: IRVTLQAQRE YPPDMQCKDK FLLQSTTVNP NTDLDDLPPD TFNKESGNSV EELKLRVAYI SPTSPEDDAS KNSQSLNSSS SQALQNLKEE RDAAARQTRQ
201: LQQELDMLKR RRNRRSDPGF SFTFAIFVGL LGALLGFLMK LLFSSPSTE
101: IRVTLQAQRE YPPDMQCKDK FLLQSTTVNP NTDLDDLPPD TFNKESGNSV EELKLRVAYI SPTSPEDDAS KNSQSLNSSS SQALQNLKEE RDAAARQTRQ
201: LQQELDMLKR RRNRRSDPGF SFTFAIFVGL LGALLGFLMK LLFSSPSTE
001: MTGVGENQLI SIQPDELKFL FELEKQSYCD LKVANKTENY VAFKVKTTSP KKYFVRPNTG VIQPWDSCII RVTLQAQREY PPDMQCKDKF LLQSTIVPPH
101: TDVDELPQDT FTKDSGKTLT ECKLKVSYIT PSTTQRSSES GATNGDGQSS ETISTIQRLK EERDAAVKQT QQLQHELETV RRRRNQRNSG NGLSLKLAAM
201: VGLIGLIIGF ILKLTLASPT
101: TDVDELPQDT FTKDSGKTLT ECKLKVSYIT PSTTQRSSES GATNGDGQSS ETISTIQRLK EERDAAVKQT QQLQHELETV RRRRNQRNSG NGLSLKLAAM
201: VGLIGLIIGF ILKLTLASPT
Arabidopsis Description
PVA21Vesicle-associated protein 2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVU1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.