Factsheet for GSMUA_Achr11P23040_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P18320_001	Banana	cytosol, nucleus, plasma membrane	86.09	84.98
TraesCS6A01G242200.1	Wheat	cytosol, golgi, plasma membrane	69.13	68.53
TraesCS6B01G282300.1	Wheat	cytosol, golgi, plasma membrane	69.13	68.53
TraesCS6D01G224100.1	Wheat	cytosol, golgi, plasma membrane	69.13	68.53
Os10t0549100-01	Rice	plasma membrane	68.26	67.38
KRH28185	Soybean	cytosol, golgi, nucleus	56.52	59.36
KRH57501	Soybean	plasma membrane	54.35	59.24
Os02t0652550-00	Rice	cytosol	68.7	59.18
KRH04206	Soybean	cytosol	56.52	58.56
CDY40565	Canola	cytosol	55.22	58.26
CDY28969	Canola	cytosol	55.22	58.26
Bra022110.1-P	Field mustard	cytosol	55.22	58.26
PGSC0003DMT400067515	Potato	nucleus	55.22	57.73
CDY33519	Canola	cytosol	54.35	57.34
AT5G47180.1	Thale cress	cytosol	54.78	57.27
Solyc08g007200.2.1	Tomato	unclear	53.48	57.21
PGSC0003DMT400052797	Potato	cytosol	53.48	57.21
CDX77746	Canola	cytosol	53.91	56.88
Solyc08g078000.2.1	Tomato	nucleus	54.35	56.82
Bra024958.1-P	Field mustard	cytosol	53.48	56.42
Bra022111.1-P	Field mustard	cytosol	53.91	56.36
CDY43438	Canola	cytosol	53.48	55.91
Bra017499.1-P	Field mustard	cytosol	53.04	55.45
CDY25982	Canola	cytosol	53.04	55.45
HORVU6Hr1G062050.9	Barley	mitochondrion	70.0	55.33
Zm00001d051329_P002	Maize	mitochondrion, plasma membrane, plastid	71.3	54.3
Zm00001d017448_P001	Maize	endoplasmic reticulum, golgi, plastid	70.87	52.58
KRH77304	Soybean	plasma membrane, vacuole	55.65	51.41
EES05798	Sorghum	plastid	71.3	50.62
Zm00001d014260_P001	Maize	plastid	37.39	48.31
GSMUA_Achr7P07100_001	Banana	cytosol	42.61	41.18
GSMUA_Achr1P20230_001	Banana	cytosol	41.74	40.51
GSMUA_Achr6P36770_001	Banana	cytosol	34.78	38.28
GSMUA_Achr1P04220_001	Banana	cytosol, nucleus, plasma membrane	38.7	37.4
GSMUA_Achr5P20880_001	Banana	cytosol	38.26	36.82
GSMUA_Achr11P...	Banana	cytosol, nucleus, plasma membrane	37.39	35.98
GSMUA_Achr7P06650_001	Banana	cytosol	33.48	35.65
GSMUA_Achr1P20280_001	Banana	cytosol	33.04	35.51
GSMUA_Achr1P05960_001	Banana	cytosol, golgi, plasma membrane	36.52	35.0
TraesCS2B01G214400.1	Wheat	mitochondrion	38.7	33.21
GSMUA_Achr11P...	Banana	cytosol	27.39	31.5
GSMUA_Achr8P11120_001	Banana	cytosol	35.22	28.93
GSMUA_Achr8P21990_001	Banana	cytosol	37.39	28.57
GSMUA_Achr10P...	Banana	cytosol	35.22	27.0
GSMUA_Achr3P08840_001	Banana	cytosol	26.96	25.83
VIT_00s0287g00080.t01	Wine grape	extracellular	38.7	25.57

Protein Annotations

Gene3D:2.60.40.10	MapMan:20.7.1	ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr11G23040_001
EnsemblPlants:GSMUA_Achr11P23040_001	EnsemblPlants:GSMUA_Achr11T23040_001	InterPro:IPR000535	InterPro:IPR013783	InterPro:Ig-like_fold	UniProt:M0RUN4
InterPro:MSP_dom	PFAM:PF00635	PIRSF:PIRSF019693	PFscan:PS50202	PANTHER:PTHR10809	PANTHER:PTHR10809:SF42
InterPro:PapD-like_sf	SUPFAM:SSF49354	TMHMM:TMhelix	UniParc:UPI000294D6F8	InterPro:VAP	:

Description

Putative Vesicle-associated membrane protein-associated protein A [Source:GMGC_GENE;Acc:GSMUA_Achr11G23040_001]

Coordinates

chr11:+:23116293..23118425

Molecular Weight (calculated)

25783.6 Da

IEP (calculated)

6.363

GRAVY (calculated)

-0.560

Length

230 amino acids

Sequence
(BLAST)

001: MGGGGQMISV YPEELTFDFE LEKPSYCNIK VVNNTEHHVA FKVKTTSPKK YFVRPNASVV QPWDSCTITV TLQPQKEYPP DMQCKDKFLI QSAKVPPSND
101: IDEIPSDTFN KDGDKVIEEL KLRVVYTSPS QSGLGNSEEE SGLASSATGK RDMHKNSSNE EIQMLQHLKE ERDTIVQQNH QLQRELDMLK RRRNRKSDAG
201: FSLTFAAFAG LVGIMVGFIL NLTLSTPPTA

Best Arabidopsis Sequence Match ( AT5G47180.2 )
(BLAST)

001: MTGVGENQLI SIQPDELKFL FELEKQSYCD LKVANKTENY VAFKVKTTSP KKYFVRPNTG VIQPWDSCII RVTLQAQREY PPDMQCKDKF LLQSTIVPPH
101: TDVDELPQDT FTKDSGKTLT ECKLKVSYIT PSTTQRSSES GATNGDGQSS ETISTIQRLK EERDAAVKQT QQLQHELETV RRRRNQRNSG NGLSLKLAAM
201: VGLIGLIIGF ILKLTLASPT

Arabidopsis Description

PVA21Vesicle-associated protein 2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.