Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plasma membrane 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0549100-01 | Rice | plasma membrane | 79.03 | 90.56 |
| TraesCS6B01G282300.1 | Wheat | cytosol, golgi, plasma membrane | 75.28 | 86.64 |
| TraesCS6D01G224100.1 | Wheat | cytosol, golgi, plasma membrane | 75.28 | 86.64 |
| TraesCS6A01G242200.1 | Wheat | cytosol, golgi, plasma membrane | 74.91 | 86.21 |
| HORVU6Hr1G062050.9 | Barley | mitochondrion | 77.53 | 71.13 |
| Zm00001d051329_P002 | Maize | mitochondrion, plasma membrane, plastid | 77.9 | 68.87 |
| GSMUA_Achr11P... | Banana | cytosol | 59.18 | 68.7 |
| GSMUA_Achr5P18320_001 | Banana | cytosol, nucleus, plasma membrane | 59.18 | 67.81 |
| Zm00001d017448_P001 | Maize | endoplasmic reticulum, golgi, plastid | 78.65 | 67.74 |
| EES05798 | Sorghum | plastid | 79.4 | 65.43 |
| KRH28185 | Soybean | cytosol, golgi, nucleus | 47.57 | 57.99 |
| AT5G47180.1 | Thale cress | cytosol | 46.07 | 55.91 |
| PGSC0003DMT400067515 | Potato | nucleus | 46.07 | 55.91 |
| KRH57501 | Soybean | plasma membrane | 43.82 | 55.45 |
| KRH04206 | Soybean | cytosol | 46.07 | 55.41 |
| CDY28969 | Canola | cytosol | 44.94 | 55.05 |
| Bra022110.1-P | Field mustard | cytosol | 44.94 | 55.05 |
| CDY40565 | Canola | cytosol | 44.94 | 55.05 |
| Solyc08g078000.2.1 | Tomato | nucleus | 45.32 | 55.0 |
| Solyc08g007200.2.1 | Tomato | unclear | 44.19 | 54.88 |
| CDY33519 | Canola | cytosol | 44.57 | 54.59 |
| PGSC0003DMT400052797 | Potato | cytosol | 43.82 | 54.42 |
| CDX77746 | Canola | cytosol | 44.19 | 54.13 |
| Bra022111.1-P | Field mustard | cytosol | 44.57 | 54.09 |
| Bra024958.1-P | Field mustard | cytosol | 43.82 | 53.67 |
| CDY43438 | Canola | cytosol | 44.19 | 53.64 |
| Bra017499.1-P | Field mustard | cytosol | 43.82 | 53.18 |
| CDY25982 | Canola | cytosol | 43.82 | 53.18 |
| Os02t0661900-02 | Rice | cytosol | 20.6 | 51.89 |
| KRH77304 | Soybean | plasma membrane, vacuole | 46.44 | 49.8 |
| Os08t0155100-01 | Rice | plasma membrane | 32.21 | 36.29 |
| Os04t0534400-01 | Rice | cytosol | 32.58 | 34.8 |
| Os02t0643000-01 | Rice | plasma membrane | 33.71 | 34.75 |
| Os08t0156700-01 | Rice | plasma membrane | 30.71 | 33.74 |
| Os10t0507600-01 | Rice | cytosol, plasma membrane | 27.72 | 30.83 |
| Os04t0554200-02 | Rice | cytosol, nucleus, plastid | 28.09 | 30.74 |
| Os04t0369000-01 | Rice | cytosol, plasma membrane | 15.73 | 30.66 |
| VIT_00s0287g00080.t01 | Wine grape | extracellular | 30.34 | 23.28 |
| Os01t0936800-01 | Rice | cytosol, plasma membrane | 31.09 | 21.84 |
| Os05t0373000-01 | Rice | cytosol | 30.71 | 17.19 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:20.7.1 | UniProt:A0A0P0VMG3 | ProteinID:BAS80068.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005789 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019538 | InterPro:IPR000535 |
| InterPro:IPR013783 | InterPro:Ig-like_fold | InterPro:MSP_dom | EnsemblPlantsGene:Os02g0652550 | EnsemblPlants:Os02t0652550-00 | PFAM:PF00635 |
| PIRSF:PIRSF019693 | PFscan:PS50202 | PANTHER:PTHR10809 | PANTHER:PTHR10809:SF42 | InterPro:PapD-like_sf | SUPFAM:SSF49354 |
| TMHMM:TMhelix | UniParc:UPI000393B858 | InterPro:VAP | SEG:seg | : | : |
Description
Similar to predicted protein. (Os02t0652550-00)
Coordinates
chr2:-:26308559..26316112
Molecular Weight (calculated)
29847.0 Da
IEP (calculated)
8.576
GRAVY (calculated)
-0.346
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEKATATGP RSECCPVIVA EKPRKGKPKP IRVAMGGGGT LISIYPEDLT FLFELDKPCY CNLKVVNNSE HHVAFKVKTT SPRKYFVRPN ANIVQPWDSC
101: TITITLQAQK EYPQDMQCKD KFLIQSTRVA ASTDMDEIPP DTFNKEVDKV IEEIKLKVVY TVPSGSSDDS GITSLGSRSF KSLSDDFTML KNASIEEIQT
201: IQRLKDERDN MLQQNQQMQR ELDVIRRRRS RKSDTGFSLT FAAFVGLIGL LVGLLMSLIF SSPQPAA
101: TITITLQAQK EYPQDMQCKD KFLIQSTRVA ASTDMDEIPP DTFNKEVDKV IEEIKLKVVY TVPSGSSDDS GITSLGSRSF KSLSDDFTML KNASIEEIQT
201: IQRLKDERDN MLQQNQQMQR ELDVIRRRRS RKSDTGFSLT FAAFVGLIGL LVGLLMSLIF SSPQPAA
001: MTGVGENQLI SIQPDELKFL FELEKQSYCD LKVANKTENY VAFKVKTTSP KKYFVRPNTG VIQPWDSCII RVTLQAQREY PPDMQCKDKF LLQSTIVPPH
101: TDVDELPQDT FTKDSGKTLT ECKLKVSYIT PSTTQRSSES GATNGDGQSS ETISTIQRLK EERDAAVKQT QQLQHELETV RRRRNQRNSG NGLSLKLAAM
201: VGLIGLIIGF ILKLTLASPT
101: TDVDELPQDT FTKDSGKTLT ECKLKVSYIT PSTTQRSSES GATNGDGQSS ETISTIQRLK EERDAAVKQT QQLQHELETV RRRRNQRNSG NGLSLKLAAM
201: VGLIGLIIGF ILKLTLASPT
Arabidopsis Description
PVA21Vesicle-associated protein 2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVU1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.