Factsheet for Os04t0369000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0661900-02	Rice	cytosol	24.82	32.08
Os08t0156700-01	Rice	plasma membrane	39.42	22.22
Os04t0534400-01	Rice	cytosol	37.96	20.8
Os10t0507600-01	Rice	cytosol, plasma membrane	35.04	20.0
Os08t0155100-01	Rice	plasma membrane	34.31	19.83
Os02t0643000-01	Rice	plasma membrane	34.31	18.15
Os10t0549100-01	Rice	plasma membrane	29.2	17.17
Os04t0554200-02	Rice	cytosol, nucleus, plastid	29.2	16.39
Os02t0652550-00	Rice	cytosol	30.66	15.73
Os01t0936800-01	Rice	cytosol, plasma membrane	28.47	10.26
Os05t0373000-01	Rice	cytosol	29.2	8.39
TraesCSU01G189900.1	Wheat	cytosol	10.95	4.53
TraesCS5A01G445000.1	Wheat	cytosol	8.76	2.38
TraesCSU01G050800.1	Wheat	cytosol, extracellular, nucleus	1.46	0.61
TraesCS6B01G013900.1	Wheat	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.60.40.10	MapMan:20.7.1	ProteinID:BAF14473.1	ProteinID:BAS88801.1	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	InterPro:IPR000535
InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:MSP_dom	EnsemblPlantsGene:Os04g0369000	EnsemblPlants:Os04t0369000-01	PFAM:PF00635
PFscan:PS50202	PANTHER:PTHR10809	PANTHER:PTHR10809:SF87	InterPro:PapD-like_sf	UniProt:Q0JDW4	SUPFAM:SSF49354
UniParc:UPI0000DD902C	InterPro:VAP	:	:	:	:

Description

RECEPTOR-LIKE CYTOPLASMIC KINASE 144PapD-like domain containing protein. (Os04t0369000-01)

Coordinates

chr4:-:17913242..17914650

Molecular Weight (calculated)

15276.1 Da

IEP (calculated)

6.680

GRAVY (calculated)

-0.434

Length

137 amino acids

Sequence
(BLAST)

001: QSSAGCKSER LVIDPLEVRF PFEKDRDVSC VLQLTNRSAD RVAFAVQVDE SKYRAVPDRG VVQPRSRRYI VATSRAQASA PTNLQRDDSF LLRSKRVEGS
101: ADDDFAEDFE KLMGKAVDGE TMRLPVVYIA LPLPPSS

Best Arabidopsis Sequence Match ( AT2G45140.2 )
(BLAST)

001: MSNELLTIDP VDLQFPFELK KQISCSLYLG NKTDNYVAFK VKTTNPKKYC VRPNTGVVHP RSSSEVLVTM QAQKEAPADL QCKDKFLLQC VVASPGATPK
101: DVTHEMFSKE AGHRVEETKL RVVYVAPPRP PSPVREGSEE GSSPRASVSD NGNASDFTAA RALVTKLTEE KNSAVQLNNR LQQELDQLRR ESKRSKSGGI
201: PFMYVLLVGL IGLILGYIMK RT

Arabidopsis Description

PVA12Vesicle-associated protein 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHC8]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.