Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- golgi 2
- nucleus 1
- extracellular 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0549100-01 | Rice | plasma membrane | 63.27 | 87.98 |
| TraesCS6D01G224100.1 | Wheat | cytosol, golgi, plasma membrane | 62.96 | 87.93 |
| TraesCS6B01G282300.1 | Wheat | cytosol, golgi, plasma membrane | 62.96 | 87.93 |
| TraesCS6A01G242200.1 | Wheat | cytosol, golgi, plasma membrane | 62.96 | 87.93 |
| Zm00001d017448_P001 | Maize | endoplasmic reticulum, golgi, plastid | 80.56 | 84.19 |
| Zm00001d051329_P002 | Maize | mitochondrion, plasma membrane, plastid | 76.23 | 81.79 |
| Os02t0652550-00 | Rice | cytosol | 65.43 | 79.4 |
| HORVU6Hr1G062050.9 | Barley | mitochondrion | 70.37 | 78.35 |
| GSMUA_Achr11P... | Banana | cytosol | 50.62 | 71.3 |
| GSMUA_Achr5P18320_001 | Banana | cytosol, nucleus, plasma membrane | 50.62 | 70.39 |
| KRH28185 | Soybean | cytosol, golgi, nucleus | 39.81 | 58.9 |
| KRH04206 | Soybean | cytosol | 40.12 | 58.56 |
| KRH57501 | Soybean | plasma membrane | 37.65 | 57.82 |
| PGSC0003DMT400067515 | Potato | nucleus | 37.96 | 55.91 |
| AT5G47180.1 | Thale cress | cytosol | 37.65 | 55.45 |
| Solyc08g078000.2.1 | Tomato | nucleus | 37.35 | 55.0 |
| Bra022110.1-P | Field mustard | cytosol | 36.73 | 54.59 |
| CDY28969 | Canola | cytosol | 36.73 | 54.59 |
| CDY40565 | Canola | cytosol | 36.73 | 54.59 |
| Bra022111.1-P | Field mustard | cytosol | 37.04 | 54.55 |
| CDY43438 | Canola | cytosol | 36.73 | 54.09 |
| CDX77746 | Canola | cytosol | 36.11 | 53.67 |
| CDY33519 | Canola | cytosol | 36.11 | 53.67 |
| CDY25982 | Canola | cytosol | 36.42 | 53.64 |
| Bra017499.1-P | Field mustard | cytosol | 36.42 | 53.64 |
| PGSC0003DMT400052797 | Potato | cytosol | 35.19 | 53.02 |
| Solyc08g007200.2.1 | Tomato | unclear | 35.19 | 53.02 |
| KRH77304 | Soybean | plasma membrane, vacuole | 40.74 | 53.01 |
| Bra024958.1-P | Field mustard | cytosol | 35.49 | 52.75 |
| KXG31128 | Sorghum | cytosol | 26.85 | 38.67 |
| EES12559 | Sorghum | cytosol | 29.01 | 37.75 |
| KXG24454 | Sorghum | cytosol | 27.78 | 37.34 |
| EES14570 | Sorghum | cytosol, nucleus, plasma membrane | 26.54 | 35.25 |
| EER91402 | Sorghum | cytosol | 27.78 | 33.09 |
| KXG26858 | Sorghum | cytosol, plastid | 24.07 | 31.97 |
| EES07504 | Sorghum | plastid | 25.93 | 31.58 |
| OQU79125 | Sorghum | cytosol | 15.43 | 26.04 |
| VIT_00s0287g00080.t01 | Wine grape | extracellular | 26.23 | 24.43 |
| KXG21863 | Sorghum | cytosol | 26.85 | 24.03 |
| EES04183 | Sorghum | cytosol | 25.93 | 22.28 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:20.7.1 | UniProt:C5XS13 | ncoils:Coil | EnsemblPlants:EES05798 | ProteinID:EES05798 |
| ProteinID:EES05798.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005789 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR000535 | InterPro:IPR013783 |
| InterPro:Ig-like_fold | InterPro:MSP_dom | PFAM:PF00635 | PIRSF:PIRSF019693 | PFscan:PS50202 | PANTHER:PTHR10809 |
| PANTHER:PTHR10809:SF42 | InterPro:PapD-like_sf | EnsemblPlantsGene:SORBI_3004G298200 | SUPFAM:SSF49354 | TMHMM:TMhelix | UniParc:UPI0001A85FD5 |
| InterPro:VAP | RefSeq:XP_002452822.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:63755439..63757985
Molecular Weight (calculated)
35837.2 Da
IEP (calculated)
8.133
GRAVY (calculated)
-0.147
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLGAKKSKA NCKPIGFSLS SSAPWLPPLP TSPPNRCLLL VYLFCLHSVL GRKGSESAPN KLTESNLFPL FNAAVYSSCG FFFCLFDQVV AMGGSGTLIS
101: VYPEELTFLF ELEKPCYCNL KVVNNSEHHV AFKVKTTSPR KYFVRPNASI VQPWDSCTIT ITLQAQKEFP PDMQCKDKFL IQSTKVPAST DMDEIPPDTF
201: NKETDKVIEE MKLKVVYTLP SGGSDDSSVS SLGSRSFKGA SDDLTMLKNA SIEEIQTIQR LKEERDNMLQ QNQQMQRELD VLRRRRSRKG DAGFSLTFAA
301: FAGLIGVLVG LLMSLIFSSP PADA
101: VYPEELTFLF ELEKPCYCNL KVVNNSEHHV AFKVKTTSPR KYFVRPNASI VQPWDSCTIT ITLQAQKEFP PDMQCKDKFL IQSTKVPAST DMDEIPPDTF
201: NKETDKVIEE MKLKVVYTLP SGGSDDSSVS SLGSRSFKGA SDDLTMLKNA SIEEIQTIQR LKEERDNMLQ QNQQMQRELD VLRRRRSRKG DAGFSLTFAA
301: FAGLIGVLVG LLMSLIFSSP PADA
001: MTGVGENQLI SIQPDELKFL FELEKQSYCD LKVANKTENY VAFKVKTTSP KKYFVRPNTG VIQPWDSCII RVTLQAQREY PPDMQCKDKF LLQSTIVPPH
101: TDVDELPQDT FTKDSGKTLT ECKLKVSYIT PSTTQRSSES GATNGDGQSS ETISTIQRLK EERDAAVKQT QQLQHELETV RRRRNQRNSG NGLSLKLAAM
201: VGLIGLIIGF ILKLTLASPT
101: TDVDELPQDT FTKDSGKTLT ECKLKVSYIT PSTTQRSSES GATNGDGQSS ETISTIQRLK EERDAAVKQT QQLQHELETV RRRRNQRNSG NGLSLKLAAM
201: VGLIGLIIGF ILKLTLASPT
Arabidopsis Description
PVA21Vesicle-associated protein 2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVU1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.