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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017499.1-P Field mustard cytosol 99.55 99.55
CDY25982 Canola cytosol 99.55 99.55
CDX77746 Canola cytosol 91.36 92.2
CDY33519 Canola cytosol 90.91 91.74
CDY40565 Canola cytosol 90.0 90.83
CDY28969 Canola cytosol 90.0 90.83
AT5G47180.1 Thale cress cytosol 90.45 90.45
KRH28185 Soybean cytosol, golgi, nucleus 62.73 63.01
Solyc08g007200.2.1 Tomato unclear 61.36 62.79
PGSC0003DMT400052797 Potato cytosol 60.91 62.33
Solyc08g078000.2.1 Tomato nucleus 60.91 60.91
PGSC0003DMT400067515 Potato nucleus 60.91 60.91
KRH57501 Soybean plasma membrane 58.18 60.66
KRH04206 Soybean cytosol 60.91 60.36
KRH77304 Soybean plasma membrane, vacuole 61.82 54.62
GSMUA_Achr11P... Banana cytosol 55.91 53.48
GSMUA_Achr5P18320_001 Banana cytosol, nucleus, plasma membrane 54.09 51.07
TraesCS6B01G282300.1 Wheat cytosol, golgi, plasma membrane 53.18 50.43
TraesCS6A01G242200.1 Wheat cytosol, golgi, plasma membrane 53.18 50.43
TraesCS6D01G224100.1 Wheat cytosol, golgi, plasma membrane 53.18 50.43
Os10t0549100-01 Rice plasma membrane 52.73 49.79
Os02t0652550-00 Rice cytosol 53.64 44.19
CDX91914 Canola cytosol 45.45 42.37
CDX74330 Canola cytosol 45.0 41.95
HORVU6Hr1G062050.9 Barley mitochondrion 54.09 40.89
CDX83400 Canola cytosol, nucleus, plasma membrane 44.55 40.66
CDX95631 Canola cytosol, golgi, plasma membrane 43.64 39.83
CDY48365 Canola cytosol 43.18 39.75
CDY37029 Canola cytosol, golgi, plasma membrane 43.18 39.75
CDX89063 Canola cytosol, golgi, plasma membrane 43.18 39.75
CDY27392 Canola cytosol, golgi, plasma membrane 43.18 39.75
CDX71796 Canola cytosol 42.73 39.5
CDY57247 Canola cytosol 42.73 39.17
CDX67837 Canola cytosol, golgi, plasma membrane 42.73 39.17
CDY41153 Canola cytosol 42.27 39.08
Zm00001d051329_P002 Maize mitochondrion, plasma membrane, plastid 53.64 39.07
CDY56247 Canola cytosol 41.82 38.33
Zm00001d014260_P001 Maize plastid 30.91 38.2
Zm00001d017448_P001 Maize endoplasmic reticulum, golgi, plastid 53.64 38.06
EES05798 Sorghum plastid 54.09 36.73
CDY44556 Canola cytosol, extracellular, plastid 14.55 31.37
VIT_00s0287g00080.t01 Wine grape extracellular 42.73 27.01
TraesCS2B01G214400.1 Wheat mitochondrion 30.91 25.37
CDY06330 Canola cytosol 36.36 23.32
CDX93534 Canola cytosol 36.82 21.83
CDX95029 Canola cytosol 36.82 21.66
CDY31124 Canola cytosol 36.36 21.0
CDY32136 Canola cytosol 35.91 20.79
CDY22664 Canola plasma membrane 36.36 18.87
Protein Annotations
Gene3D:2.60.40.10MapMan:20.7.1GO:A0A078I2U6UniProt:A0A078I2U6EnsemblPlants:CDY43438ProteinID:CDY43438
ProteinID:CDY43438.1ncoils:CoilGO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00076660001InterPro:IPR000535
InterPro:IPR013783InterPro:Ig-like_foldInterPro:MSP_domPFAM:PF00635PIRSF:PIRSF019693PFscan:PS50202
PANTHER:PTHR10809PANTHER:PTHR10809:SF42InterPro:PapD-like_sfSUPFAM:SSF49354TMHMM:TMhelixUniParc:UPI0004EE323F
InterPro:VAPSEG:seg::::
Description
BnaAnng07100DBnaAnng07100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2U6]
Coordinates
chrLK032557:+:32387..34675
Molecular Weight (calculated)
24410.2 Da
IEP (calculated)
8.602
GRAVY (calculated)
-0.415
Length
220 amino acids
Sequence
(BLAST)
001: MSGVGENQLI SIQPDELKFL FELEKQSYCD LKVSNKTDNY VAFKVKTTSP KKYFVRPNTG VIQPWDSCII RVTLQAQREY PPDMQCKDKF LLQSTTVPPH
101: TDVDELPQDT FTKDSSKTLT ECKLKVSYIA TSTTQRSSES GATSGDGNGS ESISVTAIQR LKEERDAAVK QTQQLQHDLE MLKKRRSNSA NGLSLKLAAM
201: VGLIGLIIGF ILKLTLASPT
Best Arabidopsis Sequence Match ( AT5G47180.2 )
(BLAST)
001: MTGVGENQLI SIQPDELKFL FELEKQSYCD LKVANKTENY VAFKVKTTSP KKYFVRPNTG VIQPWDSCII RVTLQAQREY PPDMQCKDKF LLQSTIVPPH
101: TDVDELPQDT FTKDSGKTLT ECKLKVSYIT PSTTQRSSES GATNGDGQSS ETISTIQRLK EERDAAVKQT QQLQHELETV RRRRNQRNSG NGLSLKLAAM
201: VGLIGLIIGF ILKLTLASPT
Arabidopsis Description
PVA21Vesicle-associated protein 2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVU1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.