Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018597.1-P | Field mustard | cytosol | 99.46 | 99.46 |
| CDX95029 | Canola | cytosol | 97.3 | 96.52 |
| CDY31124 | Canola | cytosol | 86.79 | 84.51 |
| CDY32136 | Canola | cytosol | 86.52 | 84.47 |
| CDY06330 | Canola | cytosol | 71.97 | 77.84 |
| AT1G08820.3 | Thale cress | cytosol | 79.78 | 76.68 |
| CDY22664 | Canola | plasma membrane | 73.58 | 64.39 |
| VIT_14s0030g00730.t01 | Wine grape | cytosol | 41.51 | 45.83 |
| PGSC0003DMT400057834 | Potato | cytosol | 37.2 | 43.67 |
| Solyc01g098200.2.1 | Tomato | cytosol | 36.66 | 43.04 |
| GSMUA_Achr8P21990_001 | Banana | cytosol | 34.77 | 42.86 |
| CDX91914 | Canola | cytosol | 27.22 | 42.8 |
| CDX74330 | Canola | cytosol | 27.22 | 42.8 |
| CDX83400 | Canola | cytosol, nucleus, plasma membrane | 27.49 | 42.32 |
| CDY37029 | Canola | cytosol, golgi, plasma membrane | 27.22 | 42.26 |
| CDY41153 | Canola | cytosol | 26.95 | 42.02 |
| CDX71796 | Canola | cytosol | 26.95 | 42.02 |
| GSMUA_Achr10P... | Banana | cytosol | 33.96 | 42.0 |
| CDX95631 | Canola | cytosol, golgi, plasma membrane | 27.22 | 41.91 |
| CDY27392 | Canola | cytosol, golgi, plasma membrane | 26.95 | 41.84 |
| CDX89063 | Canola | cytosol, golgi, plasma membrane | 26.95 | 41.84 |
| CDY56247 | Canola | cytosol | 26.95 | 41.67 |
| CDY48365 | Canola | cytosol | 26.68 | 41.42 |
| CDX67837 | Canola | cytosol, golgi, plasma membrane | 26.68 | 41.25 |
| CDY57247 | Canola | cytosol | 26.42 | 40.83 |
| GSMUA_Achr3P08840_001 | Banana | cytosol | 25.88 | 40.0 |
| CDY40565 | Canola | cytosol | 22.64 | 38.53 |
| CDY28969 | Canola | cytosol | 22.64 | 38.53 |
| CDY33519 | Canola | cytosol | 22.1 | 37.61 |
| CDX77746 | Canola | cytosol | 22.1 | 37.61 |
| CDY43438 | Canola | cytosol | 21.83 | 36.82 |
| CDY25982 | Canola | cytosol | 21.56 | 36.36 |
| Os01t0936800-01 | Rice | cytosol, plasma membrane | 34.5 | 33.68 |
| TraesCS3D01G462100.3 | Wheat | cytosol | 32.88 | 33.61 |
| TraesCS3A01G467600.2 | Wheat | cytosol | 32.88 | 33.61 |
| TraesCS3B01G511900.2 | Wheat | cytosol | 32.61 | 33.33 |
| EES04183 | Sorghum | cytosol | 33.69 | 33.16 |
| KRG92793 | Soybean | cytosol | 42.59 | 32.85 |
| Zm00001d011904_P001 | Maize | cytosol | 33.96 | 32.23 |
| HORVU3Hr1G099730.5 | Barley | cytosol | 32.61 | 32.18 |
| Zm00001d042180_P002 | Maize | cytosol | 34.5 | 31.92 |
| CDY44556 | Canola | cytosol, extracellular, plastid | 8.36 | 30.39 |
| KXG21863 | Sorghum | cytosol | 29.65 | 30.39 |
| Zm00001d010495_P002 | Maize | cytosol | 31.0 | 30.26 |
| KRH34006 | Soybean | cytosol | 43.13 | 30.19 |
| Os05t0373000-01 | Rice | cytosol | 32.34 | 25.16 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:20.7.1 | GO:A0A078DYQ1 | EnsemblPlants:CDX93534 | ProteinID:CDX93534 | ProteinID:CDX93534.1 |
| ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005789 | GO:GO:0016020 | EnsemblPlantsGene:GSBRNA2T00156207001 | InterPro:IPR000535 | InterPro:IPR013783 | InterPro:Ig-like_fold |
| InterPro:MSP_dom | PFAM:PF00635 | PFscan:PS50202 | PANTHER:PTHR10809 | PANTHER:PTHR10809:SF45 | InterPro:PapD-like_sf |
| SUPFAM:SSF49354 | TMHMM:TMhelix | UniParc:UPI0004EDB33B | InterPro:VAP | : | : |
Description
BnaA06g05140D
Coordinates
chrLK031876:+:603093..606382
Molecular Weight (calculated)
41560.0 Da
IEP (calculated)
7.013
GRAVY (calculated)
-0.457
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMPLLDIQP RTLKFVVDLK KQSTCVVQLT NTTNLFVAFK VKTTSPKKYC VRPNVGVVAP KSSCEFSVIM QAFKEPPPDM VCKDKFLIQS TAVPEETTDE
101: DITASMFSKA EGKHVEENKL RVTLVLPSNS PELSPVKGTL KQEAVFEDSI LKDRVYGQSE TLRPPQYESE IVKEPRMVGH DELKAPYDAK EANDLKATKG
201: GYATSNLEKE AEFDPIRYAD DGRGIKSTHN LDTPTKMAMD LDQGFANGKT SANSVSYSDE PKIPRNRDVV QMQQTDAQNI KALEESKLVK DIEGMKLKVN
301: ALESKLKQAD STISKLMEER STSFQHRESL QQELAELRTK KIVKEVHIGF PLLYVCVVAF ISIVIGYCLR T
101: DITASMFSKA EGKHVEENKL RVTLVLPSNS PELSPVKGTL KQEAVFEDSI LKDRVYGQSE TLRPPQYESE IVKEPRMVGH DELKAPYDAK EANDLKATKG
201: GYATSNLEKE AEFDPIRYAD DGRGIKSTHN LDTPTKMAMD LDQGFANGKT SANSVSYSDE PKIPRNRDVV QMQQTDAQNI KALEESKLVK DIEGMKLKVN
301: ALESKLKQAD STISKLMEER STSFQHRESL QQELAELRTK KIVKEVHIGF PLLYVCVVAF ISIVIGYCLR T
001: MNMPLLDIQP RTLQFAVDLK KQTSCVVQLT NTTHHYVAFK VKTTSPKKYC VRPNVGVVAP KSTCEFTVIM QAFKEPPPDM VCKDKFLIQS TAVSAETTDE
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT
Arabidopsis Description
PVA22VAP27-2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.