Factsheet for Zm00001d011904_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04183	Sorghum	cytosol	87.47	90.72
Zm00001d042180_P002	Maize	cytosol	86.96	84.79
TraesCS3D01G462100.3	Wheat	cytosol	65.98	71.07
TraesCS3B01G511900.2	Wheat	cytosol	65.98	71.07
TraesCS3A01G467600.2	Wheat	cytosol	65.22	70.25
Os01t0936800-01	Rice	cytosol, plasma membrane	66.75	68.68
HORVU3Hr1G099730.5	Barley	cytosol	65.22	67.82
GSMUA_Achr8P21990_001	Banana	cytosol	39.64	51.49
GSMUA_Achr10P...	Banana	cytosol	37.85	49.33
GSMUA_Achr3P08840_001	Banana	cytosol	29.92	48.75
VIT_05s0020g01970.t01	Wine grape	cytosol	34.53	46.08
VIT_14s0030g00730.t01	Wine grape	cytosol	39.13	45.54
KRH50932	Soybean	cytosol	33.25	44.07
KRH11275	Soybean	cytosol	31.2	43.88
KRH02189	Soybean	cytosol	32.99	43.73
Zm00001d024588_P001	Maize	cytosol, extracellular, mitochondrion	26.85	43.57
Zm00001d049553_P001	Maize	plasma membrane	27.11	43.44
PGSC0003DMT400057834	Potato	cytosol	34.53	42.72
Solyc01g098200.2.1	Tomato	cytosol	34.27	42.41
Zm00001d051288_P001	Maize	cytosol	24.04	41.78
Zm00001d017390_P001	Maize	cytosol	23.79	41.33
Zm00001d010495_P002	Maize	cytosol	39.64	40.79
PGSC0003DMT400027619	Potato	cytosol	36.32	40.0
CDY06330	Canola	cytosol	30.95	35.28
Bra031641.1-P	Field mustard	cytosol	30.95	35.28
Solyc01g067720.2.1	Tomato	plastid	36.57	34.54
CDX93534	Canola	cytosol	32.23	33.96
Zm00001d025939_P003	Maize	cytosol, golgi, plasma membrane	25.83	33.89
Bra018597.1-P	Field mustard	cytosol	31.97	33.69
CDX95029	Canola	cytosol	31.97	33.42
AT1G08820.3	Thale cress	cytosol	32.99	33.42
CDY32136	Canola	cytosol	32.23	33.16
Zm00001d051383_P001	Maize	cytosol, plastid	22.25	33.08
CDY31124	Canola	cytosol	32.23	33.07
Bra030744.1-P	Field mustard	cytosol	32.48	32.32
Zm00001d032507_P001	Maize	cytosol, golgi, plasma membrane	21.48	31.0
Zm00001d014260_P001	Maize	plastid	14.07	30.9
Zm00001d036342_P001	Maize	cytosol	18.93	29.6
Zm00001d051329_P002	Maize	mitochondrion, plasma membrane, plastid	22.51	29.14
CDY22664	Canola	plasma membrane	31.2	28.77
KRG92793	Soybean	cytosol	34.78	28.27
Zm00001d017448_P001	Maize	endoplasmic reticulum, golgi, plastid	22.25	28.06
KRH34006	Soybean	cytosol	35.29	26.04
Zm00001d048612_P001	Maize	cytosol	13.81	7.63

Protein Annotations

EntrezGene:100382633	Gene3D:2.60.40.10	MapMan:20.7.1	ProteinID:AQK98286.1	EMBL:BT064929	UniProt:C0P9G0
ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005789	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000535	InterPro:IPR013783	InterPro:Ig-like_fold
InterPro:MSP_dom	PFAM:PF00635	PFscan:PS50202	PANTHER:PTHR10809	PANTHER:PTHR10809:SF45	InterPro:PapD-like_sf
SUPFAM:SSF49354	TMHMM:TMhelix	UniParc:UPI000194B05E	InterPro:VAP	EnsemblPlantsGene:Zm00001d011904	EnsemblPlants:Zm00001d011904_P001
EnsemblPlants:Zm00001d011904_T001	SEG:seg	:	:	:	:

Description

Vesicle-associated protein 2-2

Coordinates

chr8:+:164264227..164283828

Molecular Weight (calculated)

43485.4 Da

IEP (calculated)

6.202

GRAVY (calculated)

-0.274

Length

391 amino acids

Sequence
(BLAST)

001: MGQDLVEIHP SELQFTFEVK KQSSCVVHLI NKSNDYVAFK VKTTSPKRYC VRPNTGVILP RKTCEFTVTM QALRTAPPDM QLKDKFLVQT TIVPYGTSDE
101: ELVPAFFSKE TGRYIEESKL RVVLVSAYQS LEEQPTNKIH DTEPVVEVPV LKEVPNIENE VPDAAKEVPA PLVQAPAIVT GIPSPVEETP GLREFRVPLN
201: EAPAVLAESP SAQKDPSVIT VEHASTVIIE HSPAISIESP PLKQSVTVFK ESPPSKQSIA AFKEYPPPSK QSIAVFKESP PLEETSPKEA VVLSDRGLFS
301: VQNHQLSHVT EDVQNLKSKL NNLESKLEEA GKMIIRLKEE SRSTTQERDK LQQEMVFLRK KGTPRSQVGF PLLFVVYVAL LGTLLGYLLR L

Best Arabidopsis Sequence Match ( AT1G08820.2 )
(BLAST)

001: MNMPLLDIQP RTLQFAVDLK KQTSCVVQLT NTTHHYVAFK VKTTSPKKYC VRPNVGVVAP KSTCEFTVIM QAFKEPPPDM VCKDKFLIQS TAVSAETTDE
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT

Arabidopsis Description

PVA22VAP27-2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.