Factsheet for Zm00001d048612_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G211600.1	Wheat	cytosol	20.9	55.43
TraesCS7D01G006600.1	Wheat	cytosol	18.79	54.06
TraesCS6A01G269800.1	Wheat	cytosol	20.2	52.38
TraesCS3D01G522300.1	Wheat	cytosol	31.21	48.15
TraesCS7D01G526500.1	Wheat	cytosol	32.63	47.53
TraesCS7D01G526400.1	Wheat	cytosol	24.43	46.26
TraesCS7A01G540300.1	Wheat	cytosol	31.21	45.85
TraesCS7B01G460100.2	Wheat	cytosol	31.36	45.49
TraesCS7B01G459800.1	Wheat	cytosol	31.78	43.77
TraesCS5A01G444900.1	Wheat	cytosol	29.66	43.12
TraesCS4B01G372400.1	Wheat	cytosol	29.94	39.77
TraesCS3B01G103500.2	Wheat	cytosol	31.21	39.75
TraesCS7B01G462400.1	Wheat	cytosol	31.21	36.11
TraesCS7A01G539900.1	Wheat	cytosol	36.16	32.57
TraesCS7B01G460600.1	Wheat	cytosol	30.79	31.73
TraesCS7B01G460400.1	Wheat	cytosol	34.46	30.54
TraesCS7B01G461000.2	Wheat	cytosol	36.02	29.96
HORVU3Hr1G006600.1	Barley	cytosol	30.08	29.96
TraesCS7B01G459900.1	Wheat	cytosol	32.63	26.77
TraesCS7B01G462600.1	Wheat	cytosol	32.63	26.77
TraesCS7A01G541400.1	Wheat	cytosol	36.44	26.63
TraesCS7B01G463000.1	Wheat	mitochondrion	37.99	26.5
Zm00001d017390_P001	Maize	cytosol	8.19	25.78
Zm00001d051288_P001	Maize	cytosol	8.05	25.33
TraesCS7A01G540200.3	Wheat	cytosol	22.46	25.12
Zm00001d024588_P001	Maize	cytosol, extracellular, mitochondrion	8.47	24.9
Zm00001d049553_P001	Maize	plasma membrane	7.91	22.95
TraesCS2B01G025500.1	Wheat	cytosol	31.21	22.71
TraesCS5A01G524700.2	Wheat	nucleus	30.65	22.03
HORVU5Hr1G012420.3	Barley	nucleus	29.94	21.5
Zm00001d025939_P003	Maize	cytosol, golgi, plasma membrane	9.04	21.48
Zm00001d036342_P001	Maize	cytosol	7.49	21.2
TraesCS4D01G348900.1	Wheat	cytosol, nucleus, plastid	29.38	21.05
Zm00001d032507_P001	Maize	cytosol, golgi, plasma membrane	7.49	19.56
Zm00001d051383_P001	Maize	cytosol, plastid	6.92	18.63
Zm00001d014260_P001	Maize	plastid	4.38	17.42
Zm00001d010495_P002	Maize	cytosol	7.49	13.95
Zm00001d051329_P002	Maize	mitochondrion, plasma membrane, plastid	5.93	13.91
Zm00001d017448_P001	Maize	endoplasmic reticulum, golgi, plastid	6.07	13.87
Zm00001d011904_P001	Maize	cytosol	7.63	13.81
Zm00001d042180_P002	Maize	cytosol	7.34	12.97
TraesCS4A01G309200.1	Wheat	cytosol, nucleus, plasma membrane	36.58	12.75
TraesCS4B01G004000.1	Wheat	cytosol, peroxisome, plasma membrane	32.34	9.68
HORVU6Hr1G011350.2	Barley	cytosol	16.67	9.41

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	EntrezGene:103652674	MapMan:18.4.1.46	Gene3D:2.60.40.10	MapMan:20.7.1
Gene3D:3.30.200.20	UniProt:A0A1D6PN23	ProteinID:AQK48254.1	ProteinID:AQK48263.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000535	InterPro:IPR000719	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR013783
InterPro:Ig-like_fold	InterPro:Kinase-like_dom_sf	InterPro:MSP_dom	PFAM:PF00069	PFAM:PF00635	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS50202	PFscan:PS50293	PANTHER:PTHR27002	PANTHER:PTHR27002:SF334	InterPro:PapD-like_sf
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF48452	SUPFAM:SSF49354	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0004DEB35B	EnsemblPlantsGene:Zm00001d048612	EnsemblPlants:Zm00001d048612_P001	EnsemblPlants:Zm00001d048612_T001
SEG:seg	:	:	:	:	:

Description

Vesicle-associated protein 1-1

Coordinates

chr4:+:1286635..1292926

Molecular Weight (calculated)

80288.4 Da

IEP (calculated)

6.991

GRAVY (calculated)

-0.497

Length

708 amino acids

Sequence
(BLAST)

001: MGSTHKEEVG VLEEILDGRK EPRKLSLSVL KHITNDFSHE RIIGYGGCGE VYKGILQNGS VAVKKIFSNL NVEDKEFDRE IQSMMQVKHP NVVRFIGYCS
101: NTEHELMRKE GKYIKVEVRE RLLCFEHISN GSLRSHITDG LRGLEWHARY KIIKGICEGL HHLHMEKNII HMDLKPANIL VHDQMVPKIA DFGLSRLAEV
201: SRTMSNERLL SLGYCAPEYQ YHGKMSLKSD IYSLGVIMLE LVTGSKEEPD ITNVLRRWSH RWKKSGQRTP SFQRHQVSKC IGLAKRCKEV EPTRRPSICD
301: ILAALGKMED MNCSDQQVDE EVTYLEDMLG IEPLDLHFLV EPTKQISCSV HLTNATNDCF AFIVQTTNPK QYCIQPDRGV VPPRSECSVA IVLSQEPTHN
401: KRCSMEDELS VQSTRVDEGV TAADVSEALF TGKEDRTVDH VSLMVGFDMS PSPPEEQTED FTFAPLASLY DEEPQLSAAK VSVWTSNQLG RSGRFSKKKL
501: VSILKSWRAR LKVSSHKKLE TPKHDCEIPE AVEHEEVAAP RCPKGPLPQR DLSPLGEACS RMNMTAIHEI LVNRHYRDDD LDPNVPSLEE WTQQSRDMLD
601: DRKRGDFTFR DKDFRAAIDW YTKCMDVGPK KASPTVLVRR SCCHLMCGNL DAALRDAMQA QRQYPDCPTS LYMQAVALSK LGMHSQAMGM LIEASEMEAN
701: QKKTRKAA

Best Arabidopsis Sequence Match ( AT4G05200.1 )
(BLAST)

001: MSSCFKSSVS LFSVFLFMIL KTVTSDPTYL YHICPNTTTY SRNSSYLTNL RTVLSSLSSP NAAYASLFDN AAAGEENDSN RVYGVFLCRG DVSAEICRDC
101: VAFAANETLQ RCPREKVAVI WYDECMVRYS NQSIVGQMRI RPGVFLTNKQ NITENQVSRF NESLPALLID VAVKAALSSR KFATEKANFT VFQTIYSLVQ
201: CTPDLTNQDC ESCLRQVINY LPRCCDRSVG GRVIAPSCSF RYELYPFYNE TIAAAPMAPP PSSTVTAPPL NIPSEKGKGK NLTVIVTAIA VPVSVCVLLL
301: GAMCWLLARR RNNKLSAETE DLDEDGITST ETLQFQFSAI EAATNKFSES NKLGHGGFGE VYKGQLITGE TVAIKRLSQG STQGAEEFKN EVDVVAKLQH
401: RNLAKLLGYC LDGEEKILVY EFVPNKSLDY FLFDNEKRRV LDWQRRYKII EGIARGILYL HRDSRLTIIH RDLKASNILL DADMHPKISD FGMARIFGVD
501: QTQANTKRIV GTYGYMSPEY AIHGKYSVKS DVYSFGVLVL ELITGKKNSS FYEEDGLGDL VTYVWKLWVE NSPLELVDEA MRGNFQTNEV IRCIHIALLC
601: VQEDSSERPS MDDILVMMNS FTVTLPIPKR SGFLLRTMKD SRDPRSGGSA SDHSATSKSL PLSVDDSSIT IVYPR

Arabidopsis Description

CRK25cysteine-rich RLK (RECEPTOR-like protein kinase) 25 [Source:TAIR;Acc:AT4G05200]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.