Factsheet for TraesCS4D01G348900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G524700.2	Wheat	nucleus	91.19	91.47
HORVU5Hr1G012420.3	Barley	nucleus	86.13	86.31
TraesCS7D01G006600.1	Wheat	cytosol	13.66	54.88
TraesCS3D01G542400.1	Wheat	cytosol	13.16	50.19
TraesCS3D01G522300.1	Wheat	cytosol	22.17	47.71
TraesCS7D01G526400.1	Wheat	cytosol	18.02	47.59
TraesCS7D01G526500.1	Wheat	cytosol	22.57	45.88
Zm00001d048612_P001	Maize	cytosol	21.05	29.38
TraesCS6D01G220300.1	Wheat	cytosol	5.67	24.56
TraesCS2D01G365300.2	Wheat	cytosol	6.07	24.1
TraesCS7D01G296900.1	Wheat	cytosol, golgi, plasma membrane	5.26	21.85
TraesCS7D01G296400.1	Wheat	cytosol	5.16	20.99
TraesCS1D01G163100.1	Wheat	cytosol	4.96	17.88
TraesCS2D01G409200.1	Wheat	cytosol, plastid	4.15	16.94
TraesCS6D01G229800.1	Wheat	cytosol	3.95	16.67
TraesCS6D01G224100.1	Wheat	cytosol, golgi, plasma membrane	3.64	15.52
TraesCS7D01G002600.1	Wheat	cytosol	21.66	14.69
TraesCS7D01G013200.1	Wheat	cytosol	20.45	14.11
TraesCS3D01G462100.3	Wheat	cytosol	4.15	11.29

Protein Annotations

Gene3D:1.10.510.10	MapMan:15.5.5.3	MapMan:18.4.1.46	Gene3D:2.100.10.30	Gene3D:2.40.330.10	Gene3D:2.60.40.10
MapMan:20.7.1	Gene3D:3.30.200.20	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0030246	InterPro:IPR000535	InterPro:IPR000719	InterPro:IPR001229
InterPro:IPR003340	InterPro:IPR013783	InterPro:IPR015300	InterPro:IPR036404	InterPro:Ig-like_fold	InterPro:Jacalin-like_lectin_dom
InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	InterPro:Kinase-like_dom_sf	InterPro:MSP_dom	PFAM:PF00069	PFAM:PF00635
PFAM:PF01419	PFAM:PF02362	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50202
PFscan:PS50863	PFscan:PS51752	PANTHER:PTHR27002	PANTHER:PTHR27002:SF225	InterPro:PapD-like_sf	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00915	SMART:SM01019	SUPFAM:SSF101936	SUPFAM:SSF49354
SUPFAM:SSF51101	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS4D01G348900	EnsemblPlants:TraesCS4D01G348900.1	TIGR:cd09612
TIGR:cd10017	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:502396614..502403156

Molecular Weight (calculated)

110053.0 Da

IEP (calculated)

5.950

GRAVY (calculated)

-0.291

Length

988 amino acids

Sequence
(BLAST)

001: MEFTAITAST AAGGRPWPPP PPPLPADHQA EEAAAAEVEK ECMFDKVVTP SDTGKLNRLV IPKQHAEKYF PLDASSNDNG LLLDFEDSAG KPWRFRYSYW
101: NSSQSYVMTK GWSRFVKETR LEAGDIVSFK RGVGEAARGR FFIDWRRRRG PDVVLPPPHH RGFNLLSVGS DGFACPDVNL EGDSVEEILD KAYITKIGPW
201: GGNRGNFNDI KVSPLRLNSI TIRSGEVIYS LAFSYSDNYG KQHHAGPWGG CKDFSYGSFD TIQLGPSEFL TKVSGTIAFS AQYSSNVITS VMFITTARRY
301: GPFGGGVGIP FQSPVMSNGS IVGFFAHAEW VVESIGLYVN SESKLWEPMK GQDSVTKIGP WGGDSGRPND VNVLPRRLLS VVVRNSTVIS SLTFTYIDWD
401: GQPQTAGPWG GLGESFDGKV DTIILGRSEF LTEVSGTLGW NSGYSDVVTS LYFVTNTGGY GPYGKGGGTR FRSSHSNGSI VGFFVNAADV IDAIGVYFSP
501: ERETCKEKEE GGFGISRSMA YRERVEIESA SNDLEHIVLD QSAEPTNLPL ALLKDITEDF NDKRQIGRGG FGIVYKGDLQ NRSVAVKRIL SCHTFNDEAF
601: NREITFLISV KHKNIVRLLG YCANTENKAM KHSESGEPWK YVFAEMRERL LCFEYIKNGS LDRYLTDELR GLEWHTRYQI IRGICDGLVY LHTEKGIVHR
701: DMKPENILLD DLMIPKITDF GISKLLDGAT HAVTSDPTGS RGYCAPEFIA RGEVSTRSDI YSLGVIITEL VTGCKDEPHI QNVLRRWRYR WNESANYPPF
801: GYQQVSKCIE IALKCLSDSP KKRPKISDIV SMLNTMESTK EHITNVGNSP AGQISAYPWE LLEFDLLELN FPFEINKQIP CSLQLTNVTD DYVAFDIEMM
901: GILRYCIEPE KRVVPPRSKC NVMVTLQPHE RVPHAMVCKD ELFILRCAAV SEGLTAEDII EDMLNKKSGK EEADKVTLKV VILPITVD

Best Arabidopsis Sequence Match ( AT1G01030.1 )
(BLAST)

001: MDLSLAPTTT TSSDQEQDRD QELTSNIGAS SSSGPSGNNN NLPMMMIPPP EKEHMFDKVV TPSDVGKLNR LVIPKQHAER YFPLDSSNNQ NGTLLNFQDR
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP

Arabidopsis Description

NGA3NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.