Factsheet for TraesCS3A01G467600.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G462100.3	Wheat	cytosol	97.52	97.52
TraesCS3B01G511900.2	Wheat	cytosol	96.14	96.14
HORVU3Hr1G099730.5	Barley	cytosol	95.59	92.29
EES04183	Sorghum	cytosol	69.97	67.37
Os01t0936800-01	Rice	cytosol, plasma membrane	69.15	66.05
Zm00001d011904_P001	Maize	cytosol	70.25	65.22
Zm00001d042180_P002	Maize	cytosol	69.7	63.09
GSMUA_Achr8P21990_001	Banana	cytosol	42.15	50.83
GSMUA_Achr10P...	Banana	cytosol	39.12	47.33
GSMUA_Achr3P08840_001	Banana	cytosol	31.13	47.08
KRH50932	Soybean	cytosol	38.02	46.78
KRH02189	Soybean	cytosol	37.74	46.44
VIT_05s0020g01970.t01	Wine grape	cytosol	37.47	46.42
TraesCS7A01G301500.1	Wheat	cytosol, golgi, plasma membrane	30.03	45.8
VIT_14s0030g00730.t01	Wine grape	cytosol	41.6	44.94
KRH11275	Soybean	cytosol	32.78	42.81
TraesCS6A01G237600.1	Wheat	cytosol, golgi, plasma membrane	26.72	42.54
TraesCS7A01G300700.1	Wheat	cytosol	28.1	41.98
TraesCS2A01G368500.1	Wheat	cytosol	27.82	40.56
Solyc01g098200.2.1	Tomato	cytosol	34.71	39.87
PGSC0003DMT400057834	Potato	cytosol	34.71	39.87
PGSC0003DMT400027619	Potato	cytosol	38.29	39.15
TraesCS6A01G242200.1	Wheat	cytosol, golgi, plasma membrane	23.14	36.21
TraesCS2A01G412000.1	Wheat	cytosol, plastid	23.69	35.54
CDY06330	Canola	cytosol	32.23	34.11
Bra031641.1-P	Field mustard	cytosol	32.23	34.11
Solyc01g067720.2.1	Tomato	plastid	38.29	33.57
TraesCS6A01G247700.1	Wheat	cytosol	21.21	32.91
CDX93534	Canola	cytosol	33.61	32.88
Bra018597.1-P	Field mustard	cytosol	33.33	32.61
AT1G08820.3	Thale cress	cytosol	34.44	32.38
CDY32136	Canola	cytosol	33.88	32.37
CDY31124	Canola	cytosol	33.88	32.28
CDX95029	Canola	cytosol	33.06	32.09
Bra030744.1-P	Field mustard	cytosol	33.88	31.3
KRG92793	Soybean	cytosol	37.19	28.07
CDY22664	Canola	plasma membrane	32.23	27.59
TraesCS2A01G024800.2	Wheat	cytosol, nucleus, plastid	11.29	27.52
TraesCS7A01G540500.1	Wheat	cytosol, extracellular, peroxisome	11.02	26.32
KRH34006	Soybean	cytosol	37.74	25.85
TraesCS7A01G540300.1	Wheat	cytosol	12.67	9.54
TraesCS5A01G444900.1	Wheat	cytosol	11.57	8.62
TraesCS7A01G540200.3	Wheat	cytosol	14.6	8.37
TraesCS4A01G476000.1	Wheat	cytosol	10.19	8.01
TraesCS7A01G539900.1	Wheat	cytosol	15.98	7.38
TraesCS7A01G541400.1	Wheat	cytosol	15.7	5.88
TraesCS4A01G479800.1	Wheat	cytosol	18.73	4.76
TraesCS6A01G004500.1	Wheat	cytosol	10.19	4.66
TraesCS4A01G497800.1	Wheat	cytosol	17.08	4.38
TraesCS5A01G524700.2	Wheat	nucleus	11.57	4.26
TraesCS4A01G309200.1	Wheat	cytosol, nucleus, plasma membrane	16.25	2.9
TraesCS5A01G445000.1	Wheat	cytosol	3.86	2.77
TraesCS6A01G269800.1	Wheat	cytosol	1.38	1.83
TraesCS7A01G540700.1	Wheat	plasma membrane	0.83	0.88
TraesCS7A01G540400.2	Wheat	cytosol	0.28	0.34
TraesCS3A01G073900.1	Wheat	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.60.40.10	MapMan:20.7.1	ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0005886	GO:GO:0016020	InterPro:IPR000535
InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:MSP_dom	PFAM:PF00635	PIRSF:PIRSF019693	PFscan:PS50202
PANTHER:PTHR10809	PANTHER:PTHR10809:SF45	InterPro:PapD-like_sf	SUPFAM:SSF49354	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G467600
EnsemblPlants:TraesCS3A01G467600.2	InterPro:VAP	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3A:-:700809320..700813976

Molecular Weight (calculated)

40421.7 Da

IEP (calculated)

5.541

GRAVY (calculated)

-0.342

Length

363 amino acids

Sequence
(BLAST)

001: MGQGVVEIQP RELQFTFELK KQSSCSVHLV NKSDEYVAFK VKTTSPKRYC VRPNIGVILP RATCDFTVTM QAQRTAPPDM QLKDKFLVQT TVVPPGTSDD
101: DLIPAFFSKE TNAYIEESKL RVVLVDASRP PVEQLINNVP STDAAVEVPV LKDTPNVQNE VPAMEKKIPA PQEKISAVVP NIPSPVRESP ILQEVPVLPH
201: EEPAILAESP PPLKDESPPP LKHESPSYIK DTSAVTIEQL SPLKEETVTS KVSPLEETLP KETVTVSDRG FFSVQNHQLS HVTEDVQNLK SKLNNLESKL
301: EGAEKMIIKL REESRTTTQE RDRLQQEMVF LKKGTPKSQL GFPLLFVVYV ALLGTSLGYL LRL

Best Arabidopsis Sequence Match ( AT1G08820.1 )
(BLAST)

001: MNMPLLDIQP RTLQFAVDLK KQTSCVVQLT NTTHHYVAFK VKTTSPKKYC VRPNVGVVAP KSTCEFTVIM QAFKEPPPDM VCKDKFLIQS TAVSAETTDE
101: DITASMFSKA EGKHIEENKL RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD ELKAADNAKE LKTPKMATVD
201: FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE
301: LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE VHNGFPLLYV CVVAFIAYVI GHFLRT

Arabidopsis Description

PVA22VAP27-2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.