Factsheet for TraesCS2A01G024800.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G036500.1	Wheat	cytosol	88.59	88.59
HORVU2Hr1G003640.7	Barley	cytosol	64.43	45.71
OQU79125	Sorghum	cytosol	52.35	40.62
TraesCS7A01G540500.1	Wheat	cytosol, extracellular, peroxisome	28.86	28.29
TraesCS6A01G237600.1	Wheat	cytosol, golgi, plasma membrane	36.24	23.68
TraesCS7A01G301500.1	Wheat	cytosol, golgi, plasma membrane	36.24	22.69
TraesCS2A01G368500.1	Wheat	cytosol	36.91	22.09
TraesCS2A01G412000.1	Wheat	cytosol, plastid	31.54	19.42
TraesCS6A01G242200.1	Wheat	cytosol, golgi, plasma membrane	29.53	18.97
TraesCS7A01G300700.1	Wheat	cytosol	30.87	18.93
TraesCS6A01G247700.1	Wheat	cytosol	29.53	18.8
TraesCS3A01G467600.2	Wheat	cytosol	27.52	11.29
TraesCS7A01G540300.1	Wheat	cytosol	29.53	9.13
TraesCS5A01G444900.1	Wheat	cytosol	28.86	8.83
TraesCS4A01G476000.1	Wheat	cytosol	25.5	8.23
TraesCS7A01G540200.3	Wheat	cytosol	28.19	6.64
TraesCS7A01G539900.1	Wheat	cytosol	27.52	5.22
TraesCS6A01G004500.1	Wheat	cytosol	25.5	4.79
TraesCS7A01G541400.1	Wheat	cytosol	30.2	4.64
TraesCS5A01G524700.2	Wheat	nucleus	30.2	4.57
TraesCS5A01G445000.1	Wheat	cytosol	12.08	3.56
TraesCS4A01G479800.1	Wheat	cytosol	26.17	2.73
TraesCS4A01G497800.1	Wheat	cytosol	25.5	2.68
TraesCS4A01G309200.1	Wheat	cytosol, nucleus, plasma membrane	26.85	1.97
TraesCS7A01G540700.1	Wheat	plasma membrane	4.03	1.76
TraesCS6A01G269800.1	Wheat	cytosol	2.68	1.47
TraesCS7A01G540400.2	Wheat	cytosol	2.01	1.03
TraesCS3A01G073900.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS2A01G024800.2	EnsemblPlantsGene:TraesCS2A01G024800	Gene3D:2.60.40.10	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	InterPro:IPR000535	InterPro:IPR013783
InterPro:Ig-like_fold	InterPro:MSP_dom	InterPro:PapD-like_sf	InterPro:VAP	PANTHER:PTHR10809	PANTHER:PTHR10809:SF87
PFAM:PF00635	PFscan:PS50202	SUPFAM:SSF49354	MapMan:20.7.1	:	:

Description

No Description!

Coordinates

chr2A:-:11914574..11915162

Molecular Weight (calculated)

16718.0 Da

IEP (calculated)

4.351

GRAVY (calculated)

-0.173

Length

149 amino acids

Sequence
(BLAST)

001: MSLASDVSND AMAQRSCDTN IISVDPSLEL RFVFEPRKET SCCLQIINKT EGIVAFNIKI NQNKYSVRPS QGTMPPCSCC YVIVTLQAQE AAPPNMRCQD
101: MLFVQNTSIT QDLESRNGEI DYQELFEKAM ADKVVDVVRL PIVYVTPDQ

Best Arabidopsis Sequence Match ( AT3G60600.1 )
(BLAST)

001: MSNIDLIGMS NRDLIGMSNS ELLTVEPLDL QFPFELKKQI SCSLYLTNKT DNNVAFKVKT TNPKKYCVRP NTGVVLPRST CEVLVTMQAQ KEAPSDMQCK
101: DKFLLQGVIA SPGVTAKEVT PEMFSKEAGH RVEETKLRVT YVAPPRPPSP VHEGSEEGSS PRASVSDNGH GSEFSFERFI VDNKAGHQEN TSEARALITK
201: LTEEKQSAIQ LNNRLQRELD QLRRESKKSQ SGGIPFMYVL LVGLIGLILG YIMKRT

Arabidopsis Description

PVA11Vesicle-associated protein 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ95]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.