Factsheet for TraesCS7A01G540500.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
extracellular 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, peroxisome
Any Predictor:	cytosol, extracellular, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G024800.2	Wheat	cytosol, nucleus, plastid	28.29	28.86
TraesCS6A01G237600.1	Wheat	cytosol, golgi, plasma membrane	37.5	25.0
TraesCS2A01G368500.1	Wheat	cytosol	39.47	24.1
TraesCS7A01G301500.1	Wheat	cytosol, golgi, plasma membrane	33.55	21.43
TraesCS7A01G300700.1	Wheat	cytosol	34.21	21.4
TraesCS7A01G540300.1	Wheat	cytosol	61.84	19.5
TraesCS6A01G247700.1	Wheat	cytosol	26.97	17.52
TraesCS2A01G412000.1	Wheat	cytosol, plastid	27.63	17.36
TraesCS6A01G242200.1	Wheat	cytosol, golgi, plasma membrane	24.34	15.95
TraesCS7A01G540200.3	Wheat	cytosol	63.82	15.32
TraesCS4A01G476000.1	Wheat	cytosol	37.5	12.34
TraesCS7A01G539900.1	Wheat	cytosol	61.84	11.96
TraesCS3A01G467600.2	Wheat	cytosol	26.32	11.02
TraesCS5A01G444900.1	Wheat	cytosol	34.21	10.68
TraesCS7A01G541400.1	Wheat	cytosol	53.95	8.46
TraesCS6A01G004500.1	Wheat	cytosol	40.13	7.68
TraesCS5A01G524700.2	Wheat	nucleus	33.55	5.18
TraesCS4A01G497800.1	Wheat	cytosol	39.47	4.23
TraesCS4A01G479800.1	Wheat	cytosol	38.82	4.13
TraesCS4A01G309200.1	Wheat	cytosol, nucleus, plasma membrane	49.34	3.69
TraesCS5A01G445000.1	Wheat	cytosol	10.53	3.17
TraesCS7A01G540700.1	Wheat	plasma membrane	2.63	1.17
TraesCS3D01G542400.1	Wheat	cytosol	0.66	0.39
TraesCS3B01G574400.1	Wheat	cytosol	0.66	0.38
TraesCS6A01G269800.1	Wheat	cytosol	0.0	0.0
TraesCS7A01G540400.2	Wheat	cytosol	0.0	0.0
TraesCS3A01G073900.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7A01G540500.1	EnsemblPlantsGene:TraesCS7A01G540500	Gene3D:2.60.40.10	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	InterPro:IPR000535	InterPro:IPR013783
InterPro:Ig-like_fold	InterPro:MSP_dom	InterPro:PapD-like_sf	InterPro:VAP	PANTHER:PTHR10809	PANTHER:PTHR10809:SF49
PFAM:PF00635	PFscan:PS50202	SEG:seg	SUPFAM:SSF49354	MapMan:20.7.1	:

Description

No Description!

Coordinates

chr7A:+:717394532..717396425

Molecular Weight (calculated)

17230.8 Da

IEP (calculated)

4.216

GRAVY (calculated)

-0.050

Length

152 amino acids

Sequence
(BLAST)

001: MKISPYSEDD MLGVEPLQLH FLFELKKQMS CALQLTNGTD SYIAFNIENT SPLSYFTQPQ KGIVPPRSMW CVEITMQLQG KAPGYMRRAN ELIVWSTKAN
101: DCLVVEDITT NMFINEAVNV VDDVNLDVVF VVYEPQEASK ETSVTIRPLI EC

Best Arabidopsis Sequence Match ( AT3G60600.2 )
(BLAST)

001: MSNIDLIGMS NRDLIGMSNS ELLTVEPLDL QFPFELKKQI SCSLYLTNKT DNNVAFKVKT TNPKKYCVRP NTGVVLPRST CEVLVTMQAQ KEAPSDMQCK
101: DKFLLQGVIA SPGVTAKEVT PEMFSKEAGH RVEETKLRVT YVAPPRPPSP VHEGSEEGSS PRASVSDNGH GSEFSFERFI VDNKAGHQEN TSEVFFTILP
201: SLSPSKPCDI IFCFCSV

Arabidopsis Description

PVA11Vesicle-associated protein 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ95]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.