Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035442.1-P | Field mustard | cytosol | 40.94 | 56.48 |
| CDY44556 | Canola | cytosol, extracellular, plastid | 30.87 | 45.1 |
| AT3G60600.1 | Thale cress | cytosol | 71.81 | 41.8 |
| AT2G45140.1 | Thale cress | cytosol | 65.1 | 40.59 |
| KRH76164 | Soybean | endoplasmic reticulum | 63.76 | 39.42 |
| KRH65384 | Soybean | cytosol | 63.76 | 39.42 |
| VIT_15s0048g00220.t01 | Wine grape | cytosol, nucleus, plasma membrane | 61.74 | 38.49 |
| GSMUA_Achr1P20280_001 | Banana | cytosol | 53.02 | 36.92 |
| GSMUA_Achr5P20880_001 | Banana | cytosol | 58.39 | 36.4 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plasma membrane | 57.05 | 35.56 |
| Zm00001d051288_P001 | Maize | cytosol | 53.69 | 35.56 |
| TraesCS7D01G296400.1 | Wheat | cytosol | 56.38 | 34.57 |
| TraesCS7A01G300700.1 | Wheat | cytosol | 56.38 | 34.57 |
| HORVU6Hr1G060760.3 | Barley | cytosol, golgi, plasma membrane | 52.35 | 34.21 |
| TraesCS6D01G220300.1 | Wheat | cytosol | 52.35 | 34.21 |
| TraesCS6B01G266100.1 | Wheat | cytosol, golgi, plasma membrane | 52.35 | 34.21 |
| GSMUA_Achr11P... | Banana | cytosol | 45.64 | 34.0 |
| KXG31128 | Sorghum | cytosol | 51.01 | 33.78 |
| TraesCS6A01G237600.1 | Wheat | cytosol, golgi, plasma membrane | 51.68 | 33.77 |
| Os08t0156700-01 | Rice | plasma membrane | 55.03 | 33.74 |
| Zm00001d049553_P001 | Maize | plasma membrane | 55.03 | 33.61 |
| Os04t0534400-01 | Rice | cytosol | 55.7 | 33.2 |
| AT4G00170.1 | Thale cress | cytosol, golgi, peroxisome, plastid | 53.02 | 33.05 |
| Zm00001d017390_P001 | Maize | cytosol | 48.99 | 32.44 |
| EES14570 | Sorghum | cytosol, nucleus, plasma membrane | 53.02 | 32.38 |
| EES12559 | Sorghum | cytosol | 53.69 | 32.13 |
| TraesCS2A01G368500.1 | Wheat | cytosol | 53.02 | 31.73 |
| TraesCS2B01G385700.2 | Wheat | cytosol | 53.02 | 31.73 |
| HORVU2Hr1G091830.4 | Barley | cytosol | 52.35 | 31.33 |
| GSMUA_Achr8P11120_001 | Banana | cytosol | 58.39 | 31.07 |
| TraesCS2D01G365300.2 | Wheat | cytosol | 51.68 | 30.92 |
| Os02t0643000-01 | Rice | plasma membrane | 53.02 | 30.5 |
| AT5G47180.1 | Thale cress | cytosol | 42.28 | 28.64 |
| HORVU7Hr1G071270.2 | Barley | mitochondrion | 55.03 | 27.8 |
| Zm00001d036342_P001 | Maize | cytosol | 44.97 | 26.8 |
| Zm00001d025939_P003 | Maize | cytosol, golgi, plasma membrane | 53.02 | 26.51 |
| AT1G08820.3 | Thale cress | cytosol | 48.99 | 18.91 |
| AT1G51270.3 | Thale cress | cytosol | 53.69 | 12.56 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:20.7.1 | EntrezGene:816915 | UniProt:A0A178VNP8 | ProteinID:AAC63657.1 | ProteinID:AEC07496.1 |
| ArrayExpress:AT2G23830 | EnsemblPlantsGene:AT2G23830 | RefSeq:AT2G23830 | TAIR:AT2G23830 | RefSeq:AT2G23830-TAIR-G | EnsemblPlants:AT2G23830.1 |
| TAIR:AT2G23830.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005789 | GO:GO:0008150 | GO:GO:0016020 | InterPro:IPR000535 | InterPro:IPR013783 | InterPro:Ig-like_fold |
| InterPro:MSP_dom | RefSeq:NP_179963.1 | UniProt:O82213 | ProteinID:OAP07424.1 | PFAM:PF00635 | PIRSF:PIRSF019693 |
| PO:PO:0009047 | PFscan:PS50202 | PANTHER:PTHR10809 | PANTHER:PTHR10809:SF94 | InterPro:PapD-like_sf | SUPFAM:SSF49354 |
| UniParc:UPI000009D886 | InterPro:VAP | : | : | : | : |
Description
PVA31Vesicle-associated protein 3-1 [Source:UniProtKB/Swiss-Prot;Acc:O82213]
Coordinates
chr2:+:10143468..10144714
Molecular Weight (calculated)
17093.8 Da
IEP (calculated)
9.041
GRAVY (calculated)
-0.316
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNNELLEIE PMYLQFPFEL KKQMSCSLYL TNKTDNNVAF KVKTTNRNNY CVRPNYGLIL PKSTCKVLVT MQAQKEVPSD MQSFEKFMIQ SVLASPGVTA
101: KEVTREMFSK ESGHVVEETK LRVTYVCSTT TNITSSPRTR RGFIFQCFC
101: KEVTREMFSK ESGHVVEETK LRVTYVCSTT TNITSSPRTR RGFIFQCFC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.