Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plasma membrane 3
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0087g00190.t01 | Wine grape | cytosol | 69.63 | 25.34 |
| VIT_03s0038g00460.t01 | Wine grape | cytosol | 32.59 | 11.86 |
| VIT_18s0001g13530.t01 | Wine grape | cytosol | 31.11 | 11.41 |
| VIT_10s0003g02590.t01 | Wine grape | cytosol | 26.67 | 10.34 |
| Zm00001d042379_P001 | Maize | peroxisome | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_00s0169g00080 | EMBL:FN596521 | EnsemblPlants:VIT_00s0169g00080.t01 | EnsemblPlantsGene:VIT_00s0169g00080 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:SH3-like_dom_sf | PANTHER:PTHR44109 | PANTHER:PTHR44109:SF1 | ProteinID:CCB60962 | ProteinID:CCB60962.1 |
| SUPFAM:SSF50044 | UniParc:UPI0002109772 | UniProt:F6I1Z5 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrUn:-:6212996..6215304
Molecular Weight (calculated)
14939.6 Da
IEP (calculated)
4.900
GRAVY (calculated)
-0.439
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MRASLIGSNM LLCMPINELN LQVEAERSYH QTVLATLEKL YDEMIMEKKR NESSSQPITM EKDVCVPTTS KDANSNGFDD HGHANQNGSY FIAKVIHPFD
101: AQADGELGLS VDDYVVVRQV PPASIANPSS NKRNV
101: AQADGELGLS VDDYVVVRQV PPASIANPSS NKRNV
001: MEAIRKQAAK LREQVARQQQ AVLKHLGHVN ADAVVVDEEE LHCHQKLQDL YSSTKAAKRL QRNIVRGLEG FIATGTKVVE IGLKFAEDFK KYGDENPDAN
101: TPLSRVAHHF GTSYKSVEGE RETLLGVLSE QVCEPIRTMI YSAPLEDARH LVNHYDRLRQ EVEAQATDVL RRRSKLKESD ISEEAYIKLK NSESRLAELK
201: SSMKTLGKEA TKAMLEVDDQ QQNVTSQRLR ALVEAERSYH RNALDILDKL HSEMIAEEEA IGSSPKSLPL HIEDSASLPQ QEPNSNSSGE IKSNPLGKIK
301: ASRREEIKSN PQEVTKPSPK DEMKSSPQEE TKSNHQKEIK SSPQEEIKKS NGSDDHHNHQ LLSQNDSYFL AKVVHPFDAQ APGELSLAVD DYVIVRQVAG
401: TGWSEGEYKG KAGWFPSAYV EKQEKAPASK IVESNSKQQ
101: TPLSRVAHHF GTSYKSVEGE RETLLGVLSE QVCEPIRTMI YSAPLEDARH LVNHYDRLRQ EVEAQATDVL RRRSKLKESD ISEEAYIKLK NSESRLAELK
201: SSMKTLGKEA TKAMLEVDDQ QQNVTSQRLR ALVEAERSYH RNALDILDKL HSEMIAEEEA IGSSPKSLPL HIEDSASLPQ QEPNSNSSGE IKSNPLGKIK
301: ASRREEIKSN PQEVTKPSPK DEMKSSPQEE TKSNHQKEIK SSPQEEIKKS NGSDDHHNHQ LLSQNDSYFL AKVVHPFDAQ APGELSLAVD DYVIVRQVAG
401: TGWSEGEYKG KAGWFPSAYV EKQEKAPASK IVESNSKQQ
Arabidopsis Description
SH3P1SH3 domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C865]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.