Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11052 | Soybean | nucleus | 35.99 | 31.22 |
| Solyc03g119800.1.1 | Tomato | nucleus | 28.34 | 26.18 |
| PGSC0003DMT400014324 | Potato | nucleus | 25.48 | 24.39 |
| VIT_17s0000g04480.t01 | Wine grape | nucleus | 16.88 | 23.14 |
| VIT_08s0007g07250.t01 | Wine grape | plastid | 18.47 | 22.31 |
| VIT_14s0108g01220.t01 | Wine grape | nucleus | 21.02 | 21.29 |
| VIT_06s0004g00490.t01 | Wine grape | nucleus | 16.88 | 19.63 |
Protein Annotations
| MapMan:15.5.7.1 | MapMan:26.9.1.7 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ProteinID:CCB58329 |
| ProteinID:CCB58329.1 | InterPro:DNA-bd_dom_sf | UniProt:F6HUA6 | EMBL:FN596251 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF1 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0001982CC7 |
| ArrayExpress:VIT_02s0025g03170 | EnsemblPlantsGene:VIT_02s0025g03170 | EnsemblPlants:VIT_02s0025g03170.t01 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2:+:2711929..2712908
Molecular Weight (calculated)
33731.6 Da
IEP (calculated)
6.849
GRAVY (calculated)
-0.446
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MHRGGGDVGM ATRGRKKTSS RGHHRFVGVR QRPSGRWVAE IKDSLQKVRL WLGTFDTAED AARAYDQAAR SLRGANARTN FELPPSSDSS DCDVNGNCMA
101: DGVEPFSFDQ FCATQVDGLL GALRAKLLDG KGLQGHPAAV VGSPHNSIGT PKREVSMPAG IVNPMLLQGP SYSPASKAPG LLLDHHDNEV ESGQAGVQWQ
201: SIYQIASPQL PWSLQPQMNP VHEGGLFCTT TTAPAITTIW PTSATTVATS DFPYSEQGSH DDLPSNKKRK VDGSTMPLFQ INGATQGVWP SEQQLLHCDN
301: GSWDPLLYVS SVLG
101: DGVEPFSFDQ FCATQVDGLL GALRAKLLDG KGLQGHPAAV VGSPHNSIGT PKREVSMPAG IVNPMLLQGP SYSPASKAPG LLLDHHDNEV ESGQAGVQWQ
201: SIYQIASPQL PWSLQPQMNP VHEGGLFCTT TTAPAITTIW PTSATTVATS DFPYSEQGSH DDLPSNKKRK VDGSTMPLFQ INGATQGVWP SEQQLLHCDN
301: GSWDPLLYVS SVLG
001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
Arabidopsis Description
RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.