Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- nucleus 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0002g00390.t01 | Wine grape | mitochondrion, plastid | 34.72 | 11.57 |
| VIT_17s0000g04230.t01 | Wine grape | plastid | 18.13 | 5.39 |
| VIT_14s0083g00170.t01 | Wine grape | cytosol | 12.95 | 5.08 |
| VIT_13s0139g00250.t01 | Wine grape | cytosol | 6.22 | 2.88 |
Protein Annotations
| ArrayExpress:VIT_06s0009g01100 | EMBL:FN595504 | EnsemblPlants:VIT_06s0009g01100.t01 | EnsemblPlantsGene:VIT_06s0009g01100 | Gene3D:1.20.120.1070 | PANTHER:PTHR10233 |
| PANTHER:PTHR10233:SF18 | ProteinID:CCB49177 | ProteinID:CCB49177.1 | SignalP:SignalP-noTM | UniParc:UPI000210A6DC | UniProt:F6HA73 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:12550599..12551563
Molecular Weight (calculated)
21828.3 Da
IEP (calculated)
8.364
GRAVY (calculated)
-0.009
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFSACILCL ILNPFSFTHH TRHHIKSPST RPTTAALEAL GVRSPASLLL SPSNTFMVDT LQHPYPKILA YYYTRVACHG VVASDWLAQA QAVIGRHHDD
101: LPPPKVEDSN KPFSIIDEFN SWWKHPDLAE AVVAFRALAL VIWSSQATIM MELEIELKKV SDSLKNIGHN LHLFDGWLRS IHAICNKNFR FRT
101: LPPPKVEDSN KPFSIIDEFN SWWKHPDLAE AVVAFRALAL VIWSSQATIM MELEIELKKV SDSLKNIGHN LHLFDGWLRS IHAICNKNFR FRT
001: MWRRSPSFIL DERRSSNSPP MADTTRGPFQ NPDSISAYYQ TRAAHHGVIT SDWLAQAQAA VGGVSGDAQH DLSVTDLGNE KSFNVIEEFN NWRKQPDLAE
101: AVAAIRALAA VIRASEASTM MELEIELKKA SDTLKSWDKT SISLTAGCDL FIRYVTRTSA LEYEDFNSAK SRLLERAEKF GEISCKARRI IAMLSQDFIF
201: DGCTILVHGL SRVVLEILKT AAQNNKLFRV LCTEGRPDGT GVLLSSELSK LDIPVKLLLD SAVAYSMDEV DMVFVGADGV VESGGIINMM GTYQIALVAH
301: SMNKPVYVAA ESYKVIETVL
101: AVAAIRALAA VIRASEASTM MELEIELKKA SDTLKSWDKT SISLTAGCDL FIRYVTRTSA LEYEDFNSAK SRLLERAEKF GEISCKARRI IAMLSQDFIF
201: DGCTILVHGL SRVVLEILKT AAQNNKLFRV LCTEGRPDGT GVLLSSELSK LDIPVKLLLD SAVAYSMDEV DMVFVGADGV VESGGIINMM GTYQIALVAH
301: SMNKPVYVAA ESYKVIETVL
Arabidopsis Description
NagB/RpiA/CoA transferase-like superfamily protein [Source:TAIR;Acc:AT1G72340]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.