Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 4
- peroxisome 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81366 | Canola | cytosol, nucleus, peroxisome | 47.62 | 28.99 |
| GSMUA_Achr6P31630_001 | Banana | cytosol, mitochondrion, peroxisome | 52.38 | 16.92 |
| KRH75678 | Soybean | plastid | 52.38 | 13.66 |
| VIT_04s0023g01650.t01 | Wine grape | mitochondrion | 64.29 | 4.03 |
| KXG35242 | Sorghum | cytosol, mitochondrion, plastid | 2.38 | 1.67 |
| VIT_14s0066g01240.t01 | Wine grape | cytosol, plastid | 26.19 | 1.65 |
| GSMUA_Achr6P31640_001 | Banana | mitochondrion | 9.52 | 0.84 |
| CDY53401 | Canola | extracellular | 2.38 | 0.7 |
Protein Annotations
| ArrayExpress:VIT_13s0064g01420 | EMBL:FN595509 | EnsemblPlants:VIT_13s0064g01420.t01 | EnsemblPlantsGene:VIT_13s0064g01420 | Gene3D:1.20.58.100 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:Fum_R/Succ_DH_flav-like_C_sf |
| InterPro:Fum_Rdtase/Succ_DH_flav-like_C | PFAM:PF02910 | ProteinID:CCB49478 | ProteinID:CCB49478.1 | SUPFAM:SSF46977 | UniParc:UPI000210A3CC |
| UniProt:F6HB94 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr13:+:23283186..23283451
Molecular Weight (calculated)
4947.8 Da
IEP (calculated)
7.687
GRAVY (calculated)
-1.279
Length
42 amino acids
Sequence
(BLAST)
(BLAST)
1: MHSAKAGKES RGAHVHEDFT KRDDEKWIRH TLGCWENEKN LV
001: MWRCVSRGFR APASKTSSLF DGVSGSRFSR FFSTGSTDTR SSYTIVDHTY DAVVVGAGGA GLRAAIGLSE HGFNTACITK LFPTRSHTVA AQGGINAALG
101: NMSEDDWRWH MYDTVKGSDW LGDQDAIQYM CREAPKAVIE LENYGLPFSR TEEGKIYQRA FGGQSLDFGK GGQAYRCACA ADRTGHALLH TLYGQAMKHN
201: TQFFVEYFAL DLLMASDGSC QGVIALNMED GTLHRFRSSQ TILATGGYGR AYFSATSAHT CTGDGNAMVA RAGLPLQDLE FVQFHPTGIY GAGCLITEGS
301: RGEGGILRNS EGERFMERYA PTAKDLASRD VVSRSMTMEI REGRGVGPHK DHIYLHLNHL PPEVLKERLP GISETAAIFA GVDVTKEPIP VLPTVHYNMG
401: GIPTNYHGEV VTIKGDDPDA VIPGLMAAGE AACASVHGAN RLGANSLLDI VVFGRACANR VAEISKPGEK QKPLEKDAGE KTIAWLDRLR NSNGSLPTST
501: IRLNMQRIMQ NNAAVFRTQE TLEEGCQLID KAWESFGDVQ VKDRSMIWNS DLIETLELEN LLINASITMH SAEARKESRG AHAREDFTKR EDGEWMKHTL
601: GYWEDEKVRL DYRPVHMDTL DDEIDTFPPK ARVY
101: NMSEDDWRWH MYDTVKGSDW LGDQDAIQYM CREAPKAVIE LENYGLPFSR TEEGKIYQRA FGGQSLDFGK GGQAYRCACA ADRTGHALLH TLYGQAMKHN
201: TQFFVEYFAL DLLMASDGSC QGVIALNMED GTLHRFRSSQ TILATGGYGR AYFSATSAHT CTGDGNAMVA RAGLPLQDLE FVQFHPTGIY GAGCLITEGS
301: RGEGGILRNS EGERFMERYA PTAKDLASRD VVSRSMTMEI REGRGVGPHK DHIYLHLNHL PPEVLKERLP GISETAAIFA GVDVTKEPIP VLPTVHYNMG
401: GIPTNYHGEV VTIKGDDPDA VIPGLMAAGE AACASVHGAN RLGANSLLDI VVFGRACANR VAEISKPGEK QKPLEKDAGE KTIAWLDRLR NSNGSLPTST
501: IRLNMQRIMQ NNAAVFRTQE TLEEGCQLID KAWESFGDVQ VKDRSMIWNS DLIETLELEN LLINASITMH SAEARKESRG AHAREDFTKR EDGEWMKHTL
601: GYWEDEKVRL DYRPVHMDTL DDEIDTFPPK ARVY
Arabidopsis Description
SDH1-1Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UAN3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.