Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- plasma membrane 2
- mitochondrion 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400012670 | Potato | plasma membrane | 71.94 | 81.16 |
| Solyc04g077460.2.1 | Tomato | plasma membrane | 80.4 | 80.04 |
| PGSC0003DMT400012672 | Potato | plasma membrane | 79.73 | 79.38 |
| KRH15469 | Soybean | plasma membrane | 70.16 | 69.54 |
| VIT_14s0083g00740.t01 | Wine grape | plasma membrane | 65.7 | 63.85 |
| Solyc09g059880.1.1 | Tomato | extracellular | 14.03 | 54.31 |
| VIT_13s0067g02220.t01 | Wine grape | golgi, plasma membrane, plastid, vacuole | 49.89 | 50.56 |
| VIT_09s0002g08410.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 44.1 | 40.08 |
Protein Annotations
| EntrezGene:100264342 | wikigene:100264342 | MapMan:24.2.3.4.7 | InterPro:AA_transpt_TM | EMBL:AM430199 | ProteinID:CAN60404 |
| ProteinID:CAN60404.1 | ProteinID:CCB45721 | ProteinID:CCB45721.1 | UniProt:F6H170 | EMBL:FN595227 | GO:GO:0003333 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015171 |
| GO:GO:0016020 | GO:GO:0016021 | EntrezGene:LOC100264342 | wikigene:LOC100264342 | PFAM:PF01490 | PANTHER:PTHR22950 |
| PANTHER:PTHR22950:SF334 | TIGR:TC65560 | TMHMM:TMhelix | UniParc:UPI00015C74DD | ArrayExpress:VIT_18s0001g08570 | EnsemblPlantsGene:VIT_18s0001g08570 |
| EnsemblPlants:VIT_18s0001g08570.t01 | unigene:Vvi.5713 | RefSeq:XP_002285488 | RefSeq:XP_002285488.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr18:+:7015535..7021203
Molecular Weight (calculated)
48934.5 Da
IEP (calculated)
7.593
GRAVY (calculated)
0.727
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MTILASADRK CRRSPRAPLL PQKYDDADSF EVGFSGASFS GAVFNLSTTV VGAGIMALPA TIKQLGMIPG LIMILLGALL TESSIEMILR FSRASKSSSY
101: SGVVGDAFGG VGRTVLQICV VVNNMGMLIV YMIIIGDVLS GTWLDKVHHL GVVEEWFGQH WWSTRSFLLL LTTLLVLTPL ISFKRVDSLR YTSALSVALA
201: VVFVAITAGV AIVKLVEGSI GMPRLLPEIV DQASFWKLFT TVPVLVTAYI CHHNIHPIEK ELHDQTQMKP IVRTSLMLCT SVYIATSFFG FLLFGDRTLD
301: DVLANFDGDL GIPYSSLLND VVRVSYAIHL MLVFPIVFFS LRLNLDGLLF PYAIPIAFDS RRFFSLTAAL MGFIFLGANF VPSIWDAFQF TGATAAVAVG
401: FIFPAAIALR DTHGIATKND RLVSCVMILL AVSASTVAIS SDIYSIFNR
101: SGVVGDAFGG VGRTVLQICV VVNNMGMLIV YMIIIGDVLS GTWLDKVHHL GVVEEWFGQH WWSTRSFLLL LTTLLVLTPL ISFKRVDSLR YTSALSVALA
201: VVFVAITAGV AIVKLVEGSI GMPRLLPEIV DQASFWKLFT TVPVLVTAYI CHHNIHPIEK ELHDQTQMKP IVRTSLMLCT SVYIATSFFG FLLFGDRTLD
301: DVLANFDGDL GIPYSSLLND VVRVSYAIHL MLVFPIVFFS LRLNLDGLLF PYAIPIAFDS RRFFSLTAAL MGFIFLGANF VPSIWDAFQF TGATAAVAVG
401: FIFPAAIALR DTHGIATKND RLVSCVMILL AVSASTVAIS SDIYSIFNR
001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE
Arabidopsis Description
AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.