CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
plasma membrane 4
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400012670	Potato	plasma membrane	62.69	71.36
VIT_18s0001g08570.t01	Wine grape	mitochondrion, plasma membrane	69.54	70.16
PGSC0003DMT400012672	Potato	plasma membrane	68.87	69.18
Solyc04g077460.2.1	Tomato	plasma membrane	68.43	68.74
KRH45158	Soybean	plasma membrane	56.73	55.15
KRH01440	Soybean	plasma membrane	56.29	54.84
KRH18319	Soybean	plasma membrane	54.75	53.33
KRG93745	Soybean	plasma membrane	54.53	53.23
KRG93742	Soybean	plasma membrane	54.08	52.92
KRH54971	Soybean	plasma membrane	53.86	51.91
KRH09698	Soybean	plasma membrane	41.94	45.35
Solyc09g059880.1.1	Tomato	extracellular	11.26	43.97
KRH73226	Soybean	endoplasmic reticulum, plasma membrane, plastid, vacuole	41.94	43.78
KRH14877	Soybean	plasma membrane	41.72	43.75
KRH31212	Soybean	plastid	41.5	43.12
KRG97662	Soybean	plastid	41.5	43.12
KRH14885	Soybean	plasma membrane	40.62	41.53
KRH73229	Soybean	plasma membrane	40.18	41.27
KRH23609	Soybean	cytosol, peroxisome, plasma membrane	41.94	39.18
KRG90323	Soybean	plasma membrane, vacuole	17.22	26.8

Protein Annotations

EntrezGene:100814034	MapMan:24.2.3.4.7	InterPro:AA_transpt_TM	EMBL:ACUP02008604	EnsemblPlantsGene:GLYMA_14G090200	GO:GO:0003333
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171
GO:GO:0016020	GO:GO:0016021	UniProt:K7M5T1	EnsemblPlants:KRH15469	ProteinID:KRH15469	ProteinID:KRH15469.1
PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF334	TMHMM:TMhelix	UniParc:UPI000233B70F	SEG:seg

Description

hypothetical protein

Coordinates

chr14:-:8218662..8222883

Molecular Weight (calculated)

49659.3 Da

IEP (calculated)

8.116

GRAVY (calculated)

0.709

Length

453 amino acids

Sequence
(BLAST)

001: MTLPLSDRKS RRSPKTYHQN LISDAAIQCG SSFSGAVFNL STTIVGAGIM ALPAAVKQLG LIPGLVMIIL CAMLTESSIS MLVRFTRASK SSTYSGVVRD
101: AFGGLGRNLL LLCIIVNNVG MLVVYMVIIG DVFSGSWSEG VHYSGVVEEW FGQRWWSTRP VLLFLTAILV LVPLASFRRV DSLRYTSALS VGLAIVFVVI
201: TAGIAIVKFI DGSIVMPRLM PKFTGLESFW KLFTTIPILV SAYICHHNVH PIENELQDPS QMKAIVRTSL LLCSSVYIAT SLFGFFLFGD NTLDDILANF
301: DGDLGVPYGS FLTDIVRVSY GIHLILVFPI VFYSLRLNID GLMFPHAIPL AFDTQRFYLV TTVLMAFIFV GANFVPSIWD AFQFIGATAA ISAGYIFPAA
401: IALRDTRGVA TKKDRLLSWF MILLGVSCST VAIFSDLYSV YNSSEAEVAE KWA

Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)

001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE

Arabidopsis Description

AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.