CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14885	Soybean	plasma membrane	94.56	94.13
Solyc06g050790.2.1	Tomato	plasma membrane	61.45	62.3
PGSC0003DMT400074955	Potato	plasma membrane	61.9	62.05
KRH31212	Soybean	plastid	53.97	54.59
KRG97662	Soybean	plastid	53.29	53.9
KRH73226	Soybean	endoplasmic reticulum, plasma membrane, plastid, vacuole	51.93	52.77
GSMUA_Achr7P22240_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	53.74	52.55
KRH14877	Soybean	plasma membrane	51.25	52.31
HORVU3Hr1G088360.1	Barley	peroxisome, plasma membrane	52.61	49.57
TraesCS3B01G378500.1	Wheat	plasma membrane	51.25	49.34
Os01t0825800-01	Rice	plasma membrane	51.02	49.34
TraesCS3D01G340400.1	Wheat	plasma membrane	51.25	49.24
TraesCS3A01G346700.1	Wheat	plasma membrane	51.25	49.24
KRG90323	Soybean	plasma membrane, vacuole	32.43	49.14
HORVU3Hr1G045630.2	Barley	plastid	51.25	47.48
KXG33635	Sorghum	plasma membrane	49.89	47.31
KRH01440	Soybean	plasma membrane	45.58	43.23
KRH45158	Soybean	plasma membrane	45.12	42.7
KRH54971	Soybean	plasma membrane	45.12	42.34
KRG93742	Soybean	plasma membrane	43.31	41.25
KRH15469	Soybean	plasma membrane	41.27	40.18
KRH18319	Soybean	plasma membrane	42.18	40.0
KRG93745	Soybean	plasma membrane	41.95	39.87
KRH09698	Soybean	plasma membrane	35.37	37.23
Zm00001d012485_P001	Maize	golgi, plasma membrane, plastid	50.79	33.63
KRH23609	Soybean	cytosol, peroxisome, plasma membrane	35.83	32.58
Zm00001d030531_P001	Maize	extracellular, plasma membrane, vacuole	11.79	28.26

Protein Annotations

EntrezGene:100794031	MapMan:24.2.3.4.7	InterPro:AA_transpt_TM	EMBL:ACUP02001272	EnsemblPlantsGene:GLYMA_02G260300	GO:GO:0003333
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171
GO:GO:0016020	GO:GO:0016021	UniProt:I1JIB8	EnsemblPlants:KRH73229	ProteinID:KRH73229	ProteinID:KRH73229.1
PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF323	TMHMM:TMhelix	UniParc:UPI0001BA5BFC	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:44690379..44693539

Molecular Weight (calculated)

47574.3 Da

IEP (calculated)

8.316

GRAVY (calculated)

0.885

Length

441 amino acids

Sequence
(BLAST)

001: MKLEESVSSS NIIARLLPPE DPNPQNGSIS GAVFNITTTM IGAGIMSIPA TMKVLGIVPG LVVIVLVALI TDVTVEFMLR YTSSGKSSTY AGMMAESFAS
101: IGSLAVKICV IISNLGVLII YFIILGDVLS GNESNGITHL GILQEWFGIN WWTSRAFALL IVALFIMLPL VMLRRVDSLK YSSAIAILLA FVFVVICSSM
201: AVSALLSGKT QTLRIVPDFS QATVLDLFTT IPVFVTGFGF HVNVHPIRAE LGKVAHMGLA ARISLIICVA IYFAIGFFGY LLFGDSIMPD VLVNFDQNSH
301: TSAGRLLNTI VRLSYALHLA LVFPIMNYSL RANIDELIFS NKNKPPLASD TPRFVSLTLT LLALTYFVAV AIPNIWFFFQ FLGSTTIVCT SFIFPAAIVL
401: RDMHGISKTK DQVMAIVVIV LAVGTSGIAI WTNLNGSGAA Q

Best Arabidopsis Sequence Match ( AT2G40420.1 )
(BLAST)

001: MSPAIKAPLL PNQEPSSSSS ENHGSFAGAV FNISTSIVGA GIMAIPAAFK VLGVIPSLSI IVIIAWLSNV SAGFLMKSSL AGESTTYAGV MKESFGKSGA
101: VAVTVVTMVV TFGSMIIFSI IIGDVISGNE KDGIIHLGLL QEWFGSHWWN TRFFGLLFIF VFLFLPLVLC RRVERLAFSS AISFLLALLF VVISSVLAII
201: ALVQGKTKPP RLFPELNDGG LSFFSLFTAS PVIVTAFTFH FNVHPVAFEL KDPLNVLSAT RISVILCATI YSATGLFCYL LFGDSTMTDV LMNFDQSTSS
301: SVGSLLNDIV RLSYAIHLML VFPLLNFSLR ANLDELLFPM KLSLVEDNKR FFALTFPLLI SCFLGAIAIP DIWYFFQFLG STSTVSIAFI FPAAIVLRNV
401: NGFSTLREKI VASVMLVLAV ATSIIAISTN IYTFTATEET

Arabidopsis Description

AVT6DAmino acid transporter AVT6D [Source:UniProtKB/Swiss-Prot;Acc:Q0WQJ3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.