Factsheet for HORVU3Hr1G088360.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plasma membrane

Predictor Summary:

plastid 1
peroxisome 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane
Any Predictor:	peroxisome, plasma membrane, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G045630.2	Barley	plastid	82.48	81.09
GSMUA_Achr7P22240_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	60.68	62.97
VIT_13s0067g02220.t01	Wine grape	golgi, plasma membrane, plastid, vacuole	54.27	57.34
Solyc05g052300.2.1	Tomato	cytosol, peroxisome, plasma membrane	50.85	54.34
PGSC0003DMT400030399	Potato	plasma membrane	50.43	53.88
KRH31212	Soybean	plastid	50.0	53.67
PGSC0003DMT400074952	Potato	plasma membrane	50.43	53.64
KRG97662	Soybean	plastid	49.79	53.44
Solyc06g050800.2.1	Tomato	plasma membrane	50.0	53.42
KRH14885	Soybean	plasma membrane	50.0	52.82
CDY27235	Canola	plasma membrane	45.73	52.71
KRH73229	Soybean	plasma membrane	49.57	52.61
KRH14877	Soybean	plasma membrane	48.29	52.31
KRH73226	Soybean	endoplasmic reticulum, plasma membrane, plastid, vacuole	48.5	52.3
CDX72159	Canola	plasma membrane	48.5	52.3
CDY27236	Canola	plasma membrane	48.08	51.84
Bra007225.1-P	Field mustard	plasma membrane	47.86	51.61
AT3G56200.1	Thale cress	plasma membrane	47.44	51.03
PGSC0003DMT400074955	Potato	plasma membrane	47.65	50.68
Solyc06g050790.2.1	Tomato	plasma membrane	47.01	50.57
CDY27234	Canola	plasma membrane	48.5	50.0
Bra017005.1-P	Field mustard	plastid	47.22	49.77
CDY52929	Canola	plastid	46.79	49.21
HORVU6Hr1G072350.1	Barley	plasma membrane	46.79	48.88
AT2G40420.1	Thale cress	plastid	45.94	48.86
Bra007226.1-P	Field mustard	plasma membrane	43.38	48.56
HORVU0Hr1G020180.1	Barley	cytosol, plasma membrane	17.73	48.54
HORVU7Hr1G065280.2	Barley	plasma membrane	47.86	48.48
CDY66186	Canola	plasma membrane, plastid	47.01	48.35
Zm00001d030531_P001	Maize	extracellular, plasma membrane, vacuole	18.16	46.2
HORVU6Hr1G034900.1	Barley	peroxisome	44.23	45.1
HORVU7Hr1G092550.1	Barley	cytosol	42.95	38.8
HORVU0Hr1G020160.1	Barley	golgi, mitochondrion	20.3	32.65
KRG90323	Soybean	plasma membrane, vacuole	17.73	28.52
HORVU7Hr1G115450.1	Barley	cytosol, peroxisome, plastid	38.46	27.91

Protein Annotations

EnsemblPlants:HORVU3Hr1G088360.1	EnsemblPlantsGene:HORVU3Hr1G088360	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:AA_transpt_TM
PANTHER:PTHR22950	PANTHER:PTHR22950:SF323	PFAM:PF01490	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B467232
UniProt:A0A287M598	MapMan:24.2.3.4.7	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:624442669..624450308

Molecular Weight (calculated)

48987.4 Da

IEP (calculated)

8.976

GRAVY (calculated)

0.751

Length

468 amino acids

Sequence
(BLAST)

001: TNAIHTPQST PNTRPPASMG KGAGAAGVDE PLLPEFSGGH GGGASVSGAV FNLSTSIIGA GIMSIPAAMR VLGVVPALVL IAAAALLSDV SVEFMLRYTG
101: WASGPPSYAG IMGDAFGRRA GAAALNVFIA FTTAGTLVVY LIIIGDVLSG SAGAGDEHAG VLQELFGPQW WTGREFVILA TAVVVLLPLV LLRRVDSLRY
201: TSAVSILLAA VFMLITMGIA VYTLFTGTAK MPRMLPDFST LASPFELFTA VPVIVVAFTF HFNVHPIRAE LSKTSDMKSA VRISLVLCSA IYAAVGFFGF
301: LLFGEATMPD VLANFDRSSG SGVPQALNDA ARLSYALHLV LVFPLLHYSL RVNVDELLFP GRRPLATDTR RFVALTAALM AALYALAIAI PSIWTLFQYT
401: GSTFAVCISL IFPGAIVLRD VHGIAKRKDK AMAAMMITLA VITSSIAIAS NVMSSINGEV KGVNAVAS

Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)

001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE

Arabidopsis Description

AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.