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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G293500.3 Wheat plasma membrane 85.91 97.16
TraesCS7A01G391600.1 Wheat plasma membrane 85.71 96.94
TraesCS7D01G387200.1 Wheat plasma membrane 85.71 96.94
Os06t0633800-01 Rice peroxisome 80.5 91.05
EER88687 Sorghum cytosol, peroxisome, plasma membrane 78.57 88.67
Zm00001d046661_P003 Maize golgi, peroxisome, plasma membrane 79.73 86.95
HORVU6Hr1G034900.1 Barley peroxisome 74.52 84.1
HORVU7Hr1G065280.2 Barley plasma membrane 59.46 66.67
VIT_14s0083g00740.t01 Wine grape plasma membrane 58.49 65.58
HORVU0Hr1G020180.1 Barley cytosol, plasma membrane 21.62 65.5
PGSC0003DMT400068294 Potato plasma membrane 57.34 64.15
Solyc02g089400.2.1 Tomato plasma membrane 56.56 63.7
KRH01440 Soybean plasma membrane 56.76 63.23
Solyc02g065680.2.1 Tomato plasma membrane 56.37 63.07
HORVU6Hr1G072350.1 Barley plasma membrane 54.44 62.95
CDX74504 Canola plasma membrane 39.19 62.46
KRG93742 Soybean plasma membrane 55.41 61.99
CDY37894 Canola plasma membrane 54.05 61.81
KRH45158 Soybean plasma membrane 55.6 61.8
CDY35776 Canola plasma membrane 54.63 61.79
CDY45907 Canola plasma membrane 54.63 61.52
AT3G30390.2 Thale cress plasma membrane 54.63 61.52
Bra020737.1-P Field mustard plasma membrane 54.44 61.44
AT5G38820.2 Thale cress plasma membrane 54.44 61.17
Bra025416.1-P Field mustard mitochondrion, peroxisome, plasma membrane 53.67 60.43
CDX86347 Canola plasma membrane 53.67 60.43
CDX85291 Canola mitochondrion, peroxisome, plasma membrane 53.86 60.39
CDY00078 Canola plasma membrane 52.51 59.39
PGSC0003DMT400003740 Potato plasma membrane 55.21 59.34
KRH18319 Soybean plasma membrane 53.09 59.14
KRG93745 Soybean plasma membrane 52.9 59.05
Bra036198.1-P Field mustard plasma membrane 51.93 58.99
CDY67720 Canola plasma membrane 52.12 58.95
Bra014071.1-P Field mustard plasma membrane 49.61 57.49
CDY17030 Canola plasma membrane 49.42 56.76
CDY47589 Canola plasma membrane 48.65 55.75
KRH54971 Soybean plasma membrane 50.19 55.32
CDY49071 Canola plasma membrane 46.72 55.13
CDX67416 Canola plasma membrane 45.95 54.09
Bra028420.1-P Field mustard plasma membrane 45.75 53.86
HORVU0Hr1G020160.1 Barley golgi, mitochondrion 24.13 42.96
HORVU3Hr1G088360.1 Barley peroxisome, plasma membrane 38.8 42.95
HORVU3Hr1G045630.2 Barley plastid 38.42 41.81
HORVU7Hr1G115450.1 Barley cytosol, peroxisome, plastid 34.17 27.44
Protein Annotations
EnsemblPlants:HORVU7Hr1G092550.1EnsemblPlantsGene:HORVU7Hr1G092550GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:AA_transpt_TM
PANTHER:PTHR22950PANTHER:PTHR22950:SF292PFAM:PF01490SEG:segTMHMM:TMhelixUniParc:UPI000B478034
UniProt:A0A287XCG2MapMan:24.2.3.4.7::::
Description
No Description!
Coordinates
chrchr7H:+:566875125..566878840
Molecular Weight (calculated)
56612.6 Da
IEP (calculated)
8.809
GRAVY (calculated)
0.525
Length
518 amino acids
Sequence
(BLAST)
001: GWSLVAEERD RRERERERER RPSLHSPQSS SLLLSGSGRV CSFGFQIPVR LLLERRVKKK MGVGNGSADV SQQMSRNEIR DETTPLLPVK VEEEGFHEFN
101: GASFSGAVFN LSTTIVGAGI MALPASIKML GLIPGLLMIV FVALLTEASI DMLIRCSHQG KITSYGWLMG EAYGQWGRIA LQASVVINNI GVMIVYMIII
201: GDVLSGTSSG GVHHRGILEG WFGAHLWNSR AIVLLVTTLF VFAPLVSFKR LDSLSYTSAL SVALAVIFVV ITAGIAIIKV FNGTVAMPKL FPEIDSLSSV
301: WKLFTAVPVL VTAYICHYNV HSIDNELEDK TQTKPIVRTS LALCSSVYIA TSFFAYLLFG EGTLDDVLAN FDSNLGIPFS SVFNDIVRVS YAAHVMLVFP
401: IVFFALRLNL DGLLXXTSRH ISHDNKRFTI ITISLLVVIY TAAIFIPSIW DAFQFTGATA AVLIGFIFPA MVILRDPYGI ATKRDKILAV TMIVLAVVSN
501: SVALYSDAMN IFRRKEVA
Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)
001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE
Arabidopsis Description
AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.