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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67720 Canola plasma membrane 98.9 98.47
CDY00078 Canola plasma membrane 97.81 97.38
Bra025416.1-P Field mustard mitochondrion, peroxisome, plasma membrane 90.79 90.0
AT3G30390.2 Thale cress plasma membrane 88.82 88.04
Bra020737.1-P Field mustard plasma membrane 87.28 86.71
Solyc02g089400.2.1 Tomato plasma membrane 71.71 71.09
VIT_14s0083g00740.t01 Wine grape plasma membrane 70.61 69.7
PGSC0003DMT400068294 Potato plasma membrane 70.18 69.11
GSMUA_Achr7P20080_001 Banana extracellular, plasma membrane, vacuole 59.43 67.58
Solyc02g065680.2.1 Tomato plasma membrane 68.42 67.39
Bra014071.1-P Field mustard plasma membrane 65.79 67.11
PGSC0003DMT400003740 Potato plasma membrane 70.18 66.39
GSMUA_Achr8P24480_001 Banana cytosol, golgi, plasma membrane 66.67 65.66
KRH01440 Soybean plasma membrane 66.89 65.59
KRH45158 Soybean plasma membrane 66.67 65.24
TraesCS7A01G212200.2 Wheat plasma membrane 64.25 63.56
HORVU7Hr1G065280.2 Barley plasma membrane 64.25 63.42
TraesCS7B01G119000.2 Wheat plasma membrane 64.04 63.34
TraesCS7D01G213900.1 Wheat plasma membrane 64.04 63.34
KRG93742 Soybean plasma membrane 64.25 63.28
TraesCS6A01G288200.1 Wheat plasma membrane 61.84 62.95
Bra028420.1-P Field mustard plasma membrane 60.53 62.73
HORVU6Hr1G072350.1 Barley plasma membrane 61.62 62.72
Os06t0275800-01 Rice plasma membrane 61.62 62.72
TraesCS6B01G317700.1 Wheat plasma membrane 61.18 62.7
TraesCS6D01G270800.1 Wheat plasma membrane 61.18 62.7
EER88229 Sorghum plasma membrane 62.94 62.53
Os02t0727100-01 Rice plasma membrane 61.4 62.5
HORVU0Hr1G020180.1 Barley cytosol, plasma membrane 22.81 60.82
Os06t0633800-01 Rice peroxisome 60.75 60.48
TraesCS7D01G387200.1 Wheat plasma membrane 60.53 60.26
TraesCS7B01G293500.3 Wheat plasma membrane 60.31 60.04
EER88687 Sorghum cytosol, peroxisome, plasma membrane 60.31 59.91
KRH18319 Soybean plasma membrane 60.96 59.78
Zm00001d015658_P001 Maize plasma membrane 58.99 59.65
TraesCS7A01G391600.1 Wheat plasma membrane 59.87 59.61
KRG93745 Soybean plasma membrane 60.31 59.27
TraesCS6A01G170700.1 Wheat plasma membrane 59.43 59.17
TraesCS6B01G198900.1 Wheat peroxisome 59.43 59.17
HORVU6Hr1G034900.1 Barley peroxisome 59.43 59.04
TraesCS6D01G160400.1 Wheat peroxisome 59.21 58.95
KXG29680 Sorghum plasma membrane 58.77 58.9
Zm00001d051703_P001 Maize plasma membrane 62.5 58.4
Zm00001d046661_P003 Maize golgi, peroxisome, plasma membrane 60.53 58.11
Os02t0191300-01 Rice cytosol, peroxisome, plasma membrane 58.11 57.73
HORVU7Hr1G092550.1 Barley cytosol 58.99 51.93
KXG30838 Sorghum plasma membrane 61.62 50.72
Zm00001d045740_P001 Maize plasma membrane 62.94 49.57
Bra007225.1-P Field mustard plasma membrane 42.76 44.93
Bra017005.1-P Field mustard plastid 42.32 43.47
HORVU0Hr1G020160.1 Barley golgi, mitochondrion 26.75 41.92
Bra003570.1-P Field mustard cytosol 41.01 40.56
Bra007226.1-P Field mustard plasma membrane 37.06 40.43
Bra035175.1-P Field mustard plasma membrane 41.23 38.84
Bra008469.1-P Field mustard plasma membrane 41.01 38.8
Protein Annotations
EnsemblPlants:Bra036198.1EnsemblPlants:Bra036198.1-PEnsemblPlantsGene:Bra036198GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF270PFAM:PF01490SEG:segTMHMM:TMhelix
UniParc:UPI0002541E48UniProt:M4F542MapMan:24.2.3.4.7:::
Description
AT3G30390 (E=5e-211) | amino acid transporter family protein
Coordinates
chrA09:-:2239654..2241787
Molecular Weight (calculated)
49068.7 Da
IEP (calculated)
6.028
GRAVY (calculated)
0.784
Length
456 amino acids
Sequence
(BLAST)
001: MTIQDVAPIP RRCDDDVLAP LLPTTQGDEL AAHDEFNGAS FSGAVFNLAT TIIGAGIMAL PATMKILGLV LGITMIVVMA FLSDASIEFL LRFSKVKESK
101: SYGGLMGDSF GKPGKVLLQV AVLVNNIGVL IVYMIIIGDV LAGKTEDGIH HYGVLEGWFG HHWWNGRLAI LIITTLGVFA PLACFKRIDS LRFTSALSVA
201: LAVVFLIITA GISIMKFING GVAMPRLLPD VSDLTSFLNL FTVVPVLVTA FICHYNVHSI QNELDDPSQI KPVVRSALVL CSSVYIMISI FGFLLFGDDT
301: LDDVLSNFDT DLGIPLGSVL NDAVRVSYAL HLMLVFPIVF YPLRINIDGL LFPSAPSLTS SNVRFGCLSA GLISVIFLGA NCIPSIWDAF QFTGATAAVC
401: LGFIFPASII LKDRHGKASS RDTILAVFMV VLAVLANAIA IYSDAYALFK RNAPRE
Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)
001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE
Arabidopsis Description
AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.