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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • peroxisome 2
  • plasma membrane 3
  • golgi 2
  • plastid 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:cytosol, golgi, plasma membrane, plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER88687 Sorghum cytosol, peroxisome, plasma membrane 93.67 93.46
TraesCS7B01G293500.3 Wheat plasma membrane 90.83 90.83
TraesCS7A01G391600.1 Wheat plasma membrane 90.83 90.83
TraesCS7D01G387200.1 Wheat plasma membrane 90.61 90.61
Zm00001d046661_P003 Maize golgi, peroxisome, plasma membrane 93.89 90.53
Os02t0191300-01 Rice cytosol, peroxisome, plasma membrane 86.9 86.71
HORVU7Hr1G092550.1 Barley cytosol 91.05 80.5
VIT_14s0083g00740.t01 Wine grape plasma membrane 67.69 67.1
Os06t0275800-01 Rice plasma membrane 64.19 65.62
Solyc02g089400.2.1 Tomato plasma membrane 65.28 65.0
PGSC0003DMT400068294 Potato plasma membrane 65.5 64.79
Solyc02g065680.2.1 Tomato plasma membrane 65.07 64.36
KRH01440 Soybean plasma membrane 65.28 64.3
Os02t0727100-01 Rice plasma membrane 62.66 64.06
CDX74504 Canola plasma membrane 45.2 63.69
CDY35776 Canola plasma membrane 63.54 63.54
CDY45907 Canola plasma membrane 63.54 63.26
Bra020737.1-P Field mustard plasma membrane 63.32 63.18
KRH45158 Soybean plasma membrane 63.76 62.66
AT3G30390.2 Thale cress plasma membrane 62.88 62.61
CDY37894 Canola plasma membrane 61.79 62.47
Bra025416.1-P Field mustard mitochondrion, peroxisome, plasma membrane 62.66 62.39
CDX86347 Canola plasma membrane 62.66 62.39
KRG93742 Soybean plasma membrane 62.88 62.2
CDX85291 Canola mitochondrion, peroxisome, plasma membrane 62.66 62.12
AT5G38820.2 Thale cress plasma membrane 62.45 62.04
CDY00078 Canola plasma membrane 61.14 61.14
PGSC0003DMT400003740 Potato plasma membrane 64.19 61.0
Bra036198.1-P Field mustard plasma membrane 60.48 60.75
CDY67720 Canola plasma membrane 60.7 60.7
KRH18319 Soybean plasma membrane 60.26 59.35
KRG93745 Soybean plasma membrane 59.83 59.05
Bra014071.1-P Field mustard plasma membrane 57.21 58.61
CDY17030 Canola plasma membrane 56.99 57.87
CDY47589 Canola plasma membrane 55.9 56.64
KRH54971 Soybean plasma membrane 57.21 55.74
CDY49071 Canola plasma membrane 53.28 55.58
CDX67416 Canola plasma membrane 52.4 54.55
Bra028420.1-P Field mustard plasma membrane 52.18 54.32
Os01t0825800-01 Rice plasma membrane 44.32 44.52
Os06t0644700-01 Rice cytosol, peroxisome, plasma membrane 37.55 36.06
Protein Annotations
MapMan:24.2.3.4.7EntrezGene:4341591InterPro:AA_transpt_TMEMBL:AK073428ProteinID:BAD37809.1ProteinID:BAF20046.1
ProteinID:BAS98748.1ProteinID:EEE66063.1GO:GO:0003333GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015171GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:Os06g0633800
EnsemblPlants:Os06t0633800-01PFAM:PF01490PANTHER:PTHR22950PANTHER:PTHR22950:SF292UniProt:Q67VL0TMHMM:TMhelix
UniParc:UPI00004263A4RefSeq:XP_015643320.1SEG:seg:::
Description
amino acid transporter-like 5Amino acid transporter, transmembrane domain containing protein. (Os06t0633800-01);Amino acid transporter, transmembrane domain containing protein. (Os06t0633800-02)
Coordinates
chr6:+:25690379..25693742
Molecular Weight (calculated)
49980.6 Da
IEP (calculated)
6.423
GRAVY (calculated)
0.703
Length
458 amino acids
Sequence
(BLAST)
001: MGISSESPNG SQQIVQKETR DETTPLLPVK VEEEGFHEFN GASFSGAVFN LSTTIVGAGI MALPASIKML GIIPGILMII VVALLTEASI DMLVRCSHQG
101: KITSYGWLMG EAYGQWGRIA LQASVVINNI GVMIVYMIII GDVLSGTSST GVHHRGILEG WFGAHLWNSR AIVLLATTLF VFAPLVSFKR LDSLRYTSAL
201: SVALAVVFVV ITAGIAIIKL FNGTVAMPKL FPELDGLSSI WKLFTAVPVL VTAYICHYNV HSIDNELEDR TQIKPIVRTS LFLCSSVYIA TSFFAYLLFG
301: EGTLDDVLAN FDANLGIPFS SVFDDIVRVS YAAHVMLVFP IVFFALRLNL DGLLFPTSRH ISRDNKRFAI ITISLLTVIY LAAIFIPSIW DAFQFTGATA
401: AVLIGFIFPA MVILRDPYGI ASKRDKILAV TMIVLAVLSN SVALYSDAMN IFRKEEEA
Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)
001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE
Arabidopsis Description
AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.