CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane, plastid
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036198.1-P	Field mustard	plasma membrane	98.47	98.9
CDY00078	Canola	plasma membrane	98.03	98.03
CDX86347	Canola	plasma membrane	91.05	90.65
CDX85291	Canola	mitochondrion, peroxisome, plasma membrane	90.39	89.61
AT3G30390.2	Thale cress	plasma membrane	89.08	88.7
CDY35776	Canola	plasma membrane	87.77	87.77
CDY45907	Canola	plasma membrane	87.99	87.61
CDY37894	Canola	plasma membrane	72.49	73.29
CDX74504	Canola	plasma membrane	51.75	72.92
Solyc02g089400.2.1	Tomato	plasma membrane	71.62	71.3
VIT_14s0083g00740.t01	Wine grape	plasma membrane	70.74	70.13
PGSC0003DMT400068294	Potato	plasma membrane	70.31	69.55
GSMUA_Achr7P20080_001	Banana	extracellular, plasma membrane, vacuole	59.39	67.83
Solyc02g065680.2.1	Tomato	plasma membrane	68.56	67.82
PGSC0003DMT400003740	Potato	plasma membrane	70.09	66.6
KRH01440	Soybean	plasma membrane	67.03	66.02
GSMUA_Achr8P24480_001	Banana	cytosol, golgi, plasma membrane	66.59	65.87
KRH45158	Soybean	plasma membrane	66.81	65.67
CDY47589	Canola	plasma membrane	64.19	65.04
CDY17030	Canola	plasma membrane	63.97	64.97
CDY49071	Canola	plasma membrane	61.57	64.24
TraesCS7A01G212200.2	Wheat	plasma membrane	64.19	63.77
HORVU7Hr1G065280.2	Barley	plasma membrane	64.19	63.64
TraesCS7D01G213900.1	Wheat	plasma membrane	63.97	63.56
TraesCS7B01G119000.2	Wheat	plasma membrane	63.97	63.56
KRG93742	Soybean	plasma membrane	64.19	63.5
CDX67416	Canola	plasma membrane	60.48	62.95
TraesCS6A01G288200.1	Wheat	plasma membrane	61.57	62.95
HORVU6Hr1G072350.1	Barley	plasma membrane	61.35	62.72
Os06t0275800-01	Rice	plasma membrane	61.35	62.72
TraesCS6B01G317700.1	Wheat	plasma membrane	60.92	62.7
TraesCS6D01G270800.1	Wheat	plasma membrane	60.92	62.7
EER88229	Sorghum	plasma membrane	62.66	62.53
Os02t0727100-01	Rice	plasma membrane	61.14	62.5
HORVU0Hr1G020180.1	Barley	cytosol, plasma membrane	23.14	61.99
Os06t0633800-01	Rice	peroxisome	60.7	60.7
TraesCS7D01G387200.1	Wheat	plasma membrane	60.48	60.48
TraesCS7B01G293500.3	Wheat	plasma membrane	60.26	60.26
EER88687	Sorghum	cytosol, peroxisome, plasma membrane	60.26	60.13
KRH18319	Soybean	plasma membrane	60.92	60.0
Zm00001d015658_P001	Maize	plasma membrane	58.95	59.87
TraesCS7A01G391600.1	Wheat	plasma membrane	59.83	59.83
KRG93745	Soybean	plasma membrane	60.26	59.48
TraesCS6B01G198900.1	Wheat	peroxisome	59.39	59.39
TraesCS6A01G170700.1	Wheat	plasma membrane	59.39	59.39
HORVU6Hr1G034900.1	Barley	peroxisome	59.39	59.26
TraesCS6D01G160400.1	Wheat	peroxisome	59.17	59.17
KXG29680	Sorghum	plasma membrane	58.73	59.12
Zm00001d051703_P001	Maize	plasma membrane	62.23	58.4
Zm00001d046661_P003	Maize	golgi, peroxisome, plasma membrane	60.48	58.32
Os02t0191300-01	Rice	cytosol, peroxisome, plasma membrane	58.08	57.95
HORVU7Hr1G092550.1	Barley	cytosol	58.95	52.12
KXG30838	Sorghum	plasma membrane	61.35	50.72
Zm00001d045740_P001	Maize	plasma membrane	62.66	49.57
CDY27235	Canola	plasma membrane	39.74	44.83
CDY27236	Canola	plasma membrane	41.92	44.24
CDX72159	Canola	plasma membrane	41.7	44.01
CDY52929	Canola	plastid	41.92	43.15
CDY27234	Canola	plasma membrane	42.14	42.51
CDY66186	Canola	plasma membrane, plastid	41.92	42.2
HORVU0Hr1G020160.1	Barley	golgi, mitochondrion	26.64	41.92
CDX79381	Canola	plasma membrane	41.48	41.13
CDX67951	Canola	plasma membrane	41.48	40.51
CDY37600	Canola	cytosol, peroxisome, plasma membrane	41.27	39.21
CDY39969	Canola	plasma membrane	41.27	39.05
CDX87318	Canola	plasma membrane	41.27	39.05
CDY38675	Canola	plasma membrane	40.83	38.8

Protein Annotations

EnsemblPlants:CDY67720	EnsemblPlantsGene:GSBRNA2T00066073001	GO:A0A078JMP1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF270	PFAM:PF01490	ProteinID:CDY67720	ProteinID:CDY67720.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE598C	UniProt:A0A078JMP1	MapMan:24.2.3.4.7	:

Description

BnaA09g52260DBnaA09g52260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMP1]

Coordinates

chrLK036434:+:2414..5046

Molecular Weight (calculated)

49172.8 Da

IEP (calculated)

6.413

GRAVY (calculated)

0.790

Length

458 amino acids

Sequence
(BLAST)

001: MTIQDVAPIP RRCSSSSDVL APLLPTTQGD EVAAHDEFNG ASFSGAVFNL ATTIIGAGIM ALPATMKILG LVLGITMIVV MAFLSDASIE FLLRFSEVKK
101: SKSYGGLMGD SFGKPGKVLL QVAVLVNNIG VLIVYMIIIG DVLAGKTEDG IHHYGVLEGW FGHHWWNGRL AILIITTLGV FAPLACFKRI DSLRFTSALS
201: VALAVVFLII TAGISIMKFI NGGVAMPRLL PDVSDLTSFL NLFTVVPVLV TAFICHYNVH SIQNELDDPS QIKPVVRSAL VLCSSVYIMI SIFGFLLFGD
301: DTLDDVLSNF DTDLGIPLGS VLNDAVRVSY ALHLMLVFPI VFYPLRINID GLLFPSAPSL TSSNVRFGCL SAGLISVIFL GANCIPSIWD AFQFTGATAA
401: VCLGFIFPAS IILKDRHGKA SSRDTILAVF MVVLAVLANA IAIYSDAYAL FKRNAPRE

Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)

001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE

Arabidopsis Description

AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.