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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • plasma membrane 4
  • golgi 2
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, golgi, plasma membrane, plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G317700.1 Wheat plasma membrane 81.25 81.8
TraesCS6D01G270800.1 Wheat plasma membrane 81.03 81.57
TraesCS6A01G288200.1 Wheat plasma membrane 81.25 81.25
HORVU6Hr1G072350.1 Barley plasma membrane 81.25 81.25
Zm00001d051703_P001 Maize plasma membrane 79.69 73.16
Os06t0275800-01 Rice plasma membrane 71.65 71.65
GSMUA_Achr7P20080_001 Banana extracellular, plasma membrane, vacuole 61.61 68.83
GSMUA_Achr8P24480_001 Banana cytosol, golgi, plasma membrane 68.97 66.74
KXG30838 Sorghum plasma membrane 79.46 64.26
Solyc02g089400.2.1 Tomato plasma membrane 64.73 63.04
CDY35776 Canola plasma membrane 64.29 62.88
CDX86347 Canola plasma membrane 64.51 62.83
Os06t0633800-01 Rice peroxisome 64.06 62.66
Solyc02g065680.2.1 Tomato plasma membrane 64.73 62.63
Bra025416.1-P Field mustard mitochondrion, peroxisome, plasma membrane 64.29 62.61
CDY45907 Canola plasma membrane 64.29 62.61
Bra020737.1-P Field mustard plasma membrane 64.06 62.53
PGSC0003DMT400068294 Potato plasma membrane 64.51 62.42
AT3G30390.2 Thale cress plasma membrane 64.06 62.39
CDX85291 Canola mitochondrion, peroxisome, plasma membrane 64.29 62.34
VIT_14s0083g00740.t01 Wine grape plasma membrane 64.29 62.34
Bra036198.1-P Field mustard plasma membrane 62.5 61.4
CDY67720 Canola plasma membrane 62.5 61.14
CDX74504 Canola plasma membrane 44.2 60.92
CDY00078 Canola plasma membrane 62.28 60.92
Os02t0191300-01 Rice cytosol, peroxisome, plasma membrane 62.28 60.78
CDY37894 Canola plasma membrane 61.16 60.49
KRG93742 Soybean plasma membrane 61.16 59.18
PGSC0003DMT400003740 Potato plasma membrane 63.17 58.71
AT5G38820.2 Thale cress plasma membrane 60.27 58.57
KRH01440 Soybean plasma membrane 60.49 58.28
KRH45158 Soybean plasma membrane 60.27 57.94
KRG93745 Soybean plasma membrane 58.93 56.9
KRH18319 Soybean plasma membrane 58.71 56.56
CDY17030 Canola plasma membrane 55.8 55.43
Bra014071.1-P Field mustard plasma membrane 55.13 55.26
CDY47589 Canola plasma membrane 55.58 55.09
KRH54971 Soybean plasma membrane 57.37 54.68
CDY49071 Canola plasma membrane 51.79 52.85
CDX67416 Canola plasma membrane 51.56 52.5
Bra028420.1-P Field mustard plasma membrane 51.34 52.27
Os01t0825800-01 Rice plasma membrane 45.98 45.18
Os06t0644700-01 Rice cytosol, peroxisome, plasma membrane 41.07 38.57
Protein Annotations
MapMan:24.2.3.4.7EntrezGene:4330594InterPro:AA_transpt_TMEMBL:AK069154ProteinID:BAD16088.1ProteinID:BAF09908.1
ProteinID:BAS80704.1GO:GO:0003333GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0015171GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:Os02g0727100EnsemblPlants:Os02t0727100-01
PFAM:PF01490PANTHER:PTHR22950PANTHER:PTHR22950:SF270UniProt:Q6Z336TMHMM:TMhelixUniParc:UPI0000358C79
RefSeq:XP_015623451.1SEG:seg::::
Description
amino acid transporter-like 3Amino acid transporter, transmembrane domain containing protein. (Os02t0727100-01)
Coordinates
chr2:-:30259579..30263449
Molecular Weight (calculated)
48111.2 Da
IEP (calculated)
7.177
GRAVY (calculated)
0.658
Length
448 amino acids
Sequence
(BLAST)
001: MVMPMPTEGS EPLLPRKQRD GGDDGAASSH DHFDGASFSG AVFNLSTTIV GAGIMALPAT MKVLGLVPGL ILVMLAAVLT DASIELLVRF SRAVGATSYG
101: EAMGDAFGAF GRGLLQLCVV VNNVGVMVVY MIIIGDVLSG KSSSGGVHHH GVIEGWFGPN RWNGRFSILV IVTLGVFTPL TCFKRVDSLK YTSALSVALA
201: VVFVVITAGI TTIKLMRGQI PMPKLFPDVH DWSSTWRLFT AAPVLVTAYI CHYNVHPIHN ELKDHSQIRP IVRASLLLCL AVYTTTSFFG FLLFGEATLD
301: DVLANFDSDL GIPYSLVLDD AVRVSYVLHL MLVFPIVFHA LRFNMDGLLF PSARPLSSDN RRFGAITAAL LTVIFLAANF VPNIWDAFQF TGATAAVAIA
401: YIFPAGMALR DRHGIATKGD KYLAVFMIVL ALVANGVAVY SDACLGTF
Best Arabidopsis Sequence Match ( AT3G30390.1 )
(BLAST)
001: MTVVGDVAPI PRRNSSTCSN DIAAPLLPEC HGDEVAHDEF NGASFSGAVF NLATTIIGAG IMALPATMKI LGLGLGITMI VVMAFLTDAS IEFLLRFSKA
101: GKNRSYGGLM GGSFGNPGRI LLQVAVLVNN IGVLIVYMII IGDVLAGKTE DGIHHFGVLE GWFGHHWWNG RAAILLITTL GVFAPLACFK RIDSLKFTSA
201: LSVALAVVFL IITAGISIMK LISGGVAMPR LLPDVTDLTS FWNLFTVVPV LVTAFICHYN VHSIQNELED PSQIRPVVRS ALMLCSSVYI MTSIFGFLLF
301: GDDTLDDVLA NFDTDLGIPF GSILNDAVRV SYALHLMLVF PIVFYPLRIN IDGLLFPSAR SLSTSNVRFG CLTAGLISVI FLGANFIPSI WDAFQFTGAT
401: AAVCLGFIFP ASIILKDRHD KATNRDTTLA IFMIVLAVLS NAIAIYSDAY ALFKKNAPRE
Arabidopsis Description
AVT6AAmino acid transporter AVT6A [Source:UniProtKB/Swiss-Prot;Acc:Q9LI61]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.