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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 5
  • golgi 2
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:golgi, plasma membrane, plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47589 Canola plasma membrane 95.3 94.25
CDY17030 Canola plasma membrane 93.06 92.24
Bra028420.1-P Field mustard plasma membrane 78.52 79.77
AT5G38820.2 Thale cress plasma membrane 75.17 72.89
Bra025416.1-P Field mustard mitochondrion, peroxisome, plasma membrane 69.35 67.39
Bra020737.1-P Field mustard plasma membrane 68.68 66.88
Bra036198.1-P Field mustard plasma membrane 67.11 65.79
Solyc02g089400.2.1 Tomato plasma membrane 65.32 63.48
VIT_14s0083g00740.t01 Wine grape plasma membrane 65.32 63.2
PGSC0003DMT400068294 Potato plasma membrane 65.1 62.85
HORVU0Hr1G020180.1 Barley cytosol, plasma membrane 23.94 62.57
Solyc02g065680.2.1 Tomato plasma membrane 64.21 61.99
KRH01440 Soybean plasma membrane 63.98 61.51
KRH45158 Soybean plasma membrane 63.98 61.37
KRG93742 Soybean plasma membrane 63.53 61.34
GSMUA_Achr7P20080_001 Banana extracellular, plasma membrane, vacuole 54.81 61.1
PGSC0003DMT400003740 Potato plasma membrane 63.76 59.13
TraesCS7B01G119000.2 Wheat plasma membrane 60.63 58.79
HORVU7Hr1G065280.2 Barley plasma membrane 60.63 58.66
TraesCS7A01G212200.2 Wheat plasma membrane 60.4 58.57
TraesCS7D01G213900.1 Wheat plasma membrane 60.4 58.57
GSMUA_Achr8P24480_001 Banana cytosol, golgi, plasma membrane 59.96 57.88
Os06t0633800-01 Rice peroxisome 58.61 57.21
EER88229 Sorghum plasma membrane 58.61 57.08
Zm00001d015658_P001 Maize plasma membrane 57.49 56.98
Os06t0275800-01 Rice plasma membrane 57.05 56.92
TraesCS7B01G293500.3 Wheat plasma membrane 58.17 56.77
TraesCS7D01G387200.1 Wheat plasma membrane 58.17 56.77
TraesCS7A01G391600.1 Wheat plasma membrane 58.17 56.77
KXG29680 Sorghum plasma membrane 57.72 56.7
EER88687 Sorghum cytosol, peroxisome, plasma membrane 57.94 56.43
KRH18319 Soybean plasma membrane 58.39 56.13
KRG93745 Soybean plasma membrane 58.17 56.03
TraesCS6A01G170700.1 Wheat plasma membrane 57.05 55.68
TraesCS6D01G160400.1 Wheat peroxisome 56.82 55.46
TraesCS6B01G198900.1 Wheat peroxisome 56.82 55.46
HORVU6Hr1G072350.1 Barley plasma membrane 55.48 55.36
HORVU6Hr1G034900.1 Barley peroxisome 56.82 55.34
TraesCS6B01G317700.1 Wheat plasma membrane 55.03 55.28
TraesCS6D01G270800.1 Wheat plasma membrane 55.03 55.28
TraesCS6A01G288200.1 Wheat plasma membrane 55.26 55.13
Os02t0727100-01 Rice plasma membrane 55.26 55.13
Zm00001d046661_P003 Maize golgi, peroxisome, plasma membrane 57.94 54.53
Os02t0191300-01 Rice cytosol, peroxisome, plasma membrane 55.93 54.47
Zm00001d051703_P001 Maize plasma membrane 55.7 51.02
HORVU7Hr1G092550.1 Barley cytosol 57.49 49.61
Zm00001d045740_P001 Maize plasma membrane 59.51 45.94
KXG30838 Sorghum plasma membrane 55.26 44.58
Bra007225.1-P Field mustard plasma membrane 40.27 41.47
Bra017005.1-P Field mustard plastid 38.26 38.51
HORVU0Hr1G020160.1 Barley golgi, mitochondrion 25.06 38.49
Bra003570.1-P Field mustard cytosol 38.7 37.53
Bra007226.1-P Field mustard plasma membrane 34.68 37.08
Bra008469.1-P Field mustard plasma membrane 38.03 35.27
Bra035175.1-P Field mustard plasma membrane 38.03 35.12
Protein Annotations
EnsemblPlants:Bra014071.1EnsemblPlants:Bra014071.1-PEnsemblPlantsGene:Bra014071GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF292PFAM:PF01490SEG:segTMHMM:TMhelix
UniParc:UPI0002546AEAUniProt:M4DC58MapMan:24.2.3.4.7:::
Description
AT5G38820 (E=1e-180) | amino acid transporter family protein
Coordinates
chrA08:+:3833641..3835271
Molecular Weight (calculated)
48636.2 Da
IEP (calculated)
7.044
GRAVY (calculated)
0.696
Length
447 amino acids
Sequence
(BLAST)
001: MSSYTIKETM ATKDEVQNDP LLQASESDGH EEFNGASFTG AVLNLATAII GAGIMALPAT MKILGLVPGI VMILLMAFLT DKTIDFLLSF SGVGNARRSY
101: GGLMEDSFGK TGRIVLQVAV LVTNIGVLIV YMIIIGDVLE GMLEGWFGES WWDKRSIVLL FTTLCVFAPL ASFKRIDTLR FTSALSLVLA VVFLVITAGI
201: VVTKFYRGGL MKPRLFPNVT DLSSVWKLFT VVPVLVNAYI CHSNVHNIQN ELEDSIQIKA VVRSALVMSS SVYVMTSLFG YLLFGESTLD DVLANFDTDL
301: KIPFGPVLSE AVRLSYAAHL MLVFPVIFYP LRVNLDGLLF PTATPSLTTS NMRFGSITAG LIAVIFVGAN FIPSIWDAFQ LTGATTSVCI GFIFPAAVIL
401: KDRHNRATKM DKTIAIFVIV LAVFSSAVAI YSDAYALVKK NKSTFPM
Best Arabidopsis Sequence Match ( AT5G38820.2 )
(BLAST)
001: MISGSMENLD EIRTDIVEST APLLQESSSE SNGGGEFNGA SFSGAVFNLA TTIIGAGIMA LPATMKILGL IPGITIIVLM AFLTDASIEF LLRFSNIGNQ
101: RSYGGVMDDS FGKCGRIMLQ VSILVSNIGV LIVYMIIIGD VLAGKNEYGI HHAGMLEGWF GISWWNRRTF VLLVTTLTVF APLTCFKRID SLRFTSAISV
201: ALAVVFLVIT AGITIIKLFT DGLMMPRLLP NVTDLSSFWK LFTVVPVLVN AYICHYNVHS IQNELEDPSR IKPVVRSALA MCSSVYVMTS LFGYLLFGDG
301: TLDDVLANFD TDLGIPFGSV LNDAVRFSYA AHLMLVFPVV FYPLRINIDG LIFPTAPPLT SSESDLRFGS ITAGLIAVIF LGANFIPSIW DAFQFTGATA
401: AVCIGFIFPA AVILKDRHNQ ATKRDKTIAI CMIVLAVFSN AIAIYSDAYA LFKKHTYVYP I
Arabidopsis Description

SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.